Gene detail information of Glyur000062s00005458 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13660.1 | 1.00E-40 | pinoresinol reductase 2 |
| NR | XP_004509553.1 | 2.49E-58 | PREDICTED: isoflavone reductase homolog [Cicer arietinum] |
| COG | NP_441851.1 | 3.00E-06 | 3-beta hydroxysteroid dehydrogenase/isomerase [Synechocystis sp. PCC 6803] |
| Swissprot | tr|P93143|PILR1_FORIN | 2.00E-51 | Bifunctional pinoresinol-lariciresinol reductase |
| trEMBL | tr|I1MMK6|I1MMK6_SOYBN | 3.00E-57 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G17680.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 45485 | 45844 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000062s00005458.1 | PF05368.8 | NmrA | 6 | 107 | 4.60E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 102.221 |
| SRR1783600 | control | 101.243 |
| SRR1783602 | moderate drought stress | 85.492 |
| SRR1811619 | moderate drought stress | 87.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.926 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.155 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 160.134 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 162.164 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.427 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.067 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.721 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 285.552 |
| SRR2868004 | Drought Stress (root) | 331.897 |
| SRR2967015 | Control (root) | 282.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.964 |
| SRR9715740 | Leaf | 16.190 |
| SRR9715741 | Leaf | 59.105 |
| SRR9715739 | Root | 23.115 |
| SRR9715742 | Root | 104.316 |
| SRR9715743 | Root | 80.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.259 |
| SRR8749028 | MeJA induced 9h | 116.238 |
| SRR8749029 | MeJA induced 9h | 37.285 |
| SRR8749030 | Uninduced | 268.608 |
| SRR8749031 | Uninduced | 135.510 |
| SRR8749032 | Uninduced | 74.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 211.363 |
| SRR8400027 | Control - Root | 146.735 |