Gene detail information of Glyur000062s00005457


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G23740.12.00E-59ribosomal protein S11-beta
NRXP_007155106.16.27E-90hypothetical protein PHAVU_003G173800g [Phaseolus vulgaris]
COGYP_003726543.15.00E-2630S ribosomal protein S17 [Methanohalobium evestigatum Z-7303]
Swissprottr|P17093|RS11_SOYBN2.00E-9040S ribosomal protein S11
trEMBLtr|V7CCT3|V7CCT3_PHAVU2.00E-90Uncharacterized protein {ECO:0000313|EMBL:ESW27100.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold000623965541602-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

"


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000062s00005457.1PF00366.15Ribosomal_S17741302.10E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control81.609
SRR1783600control77.853
SRR1783602moderate drought stress55.394
SRR1811619moderate drought stress56.073

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain95.110
DRR006520Root Summer glycyrrhizin high producing strain88.205
DRR006521Root Winter glycyrrhizin high producing strain58.999
DRR006522Root Winter glycyrrhizin high producing strain56.875
DRR006523Root Summer glycyrrhizin low producing strain54.248
DRR006524Root Summer glycyrrhizin low producing strain52.007
DRR006525Leaf Summer glycyrrhizin high producing strain31.034
DRR006526Leaf Summer glycyrrhizin high producing strain27.872

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)295.648
SRR2868004Drought Stress (root)168.064
SRR2967015Control (root)152.453

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf88.064
SRR9715740Leaf85.702
SRR9715741Leaf70.749
SRR9715739Root170.310
SRR9715742Root122.951
SRR9715743Root135.427

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h349.550
SRR8749028MeJA induced 9h174.779
SRR8749029MeJA induced 9h209.490
SRR8749030Uninduced44.615
SRR8749031Uninduced17.746
SRR8749032Uninduced30.932

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root207.891
SRR8400027Control - Root180.173

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved