Gene detail information of Glyur000062s00005454 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G19070.1 | 2.00E-24 | Putative membrane lipoprotein |
| NR | XP_004509548.1 | 8.28E-107 | PREDICTED: cadmium-induced protein AS8-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|P42735|CDI8_ARATH | 7.00E-55 | Cadmium-induced protein AS8 |
| trEMBL | tr|I3S7C4|I3S7C4_MEDTR | 1.00E-106 | Uncharacterized protein {ECO:0000313|EMBL:AFK36166.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 20198 | 23717 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.993 |
| SRR1783600 | control | 4.143 |
| SRR1783602 | moderate drought stress | 4.172 |
| SRR1811619 | moderate drought stress | 4.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.458 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.680 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.819 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.672 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.197 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.350 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.514 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.352 |
| SRR2868004 | Drought Stress (root) | 2.488 |
| SRR2967015 | Control (root) | 1.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.072 |
| SRR9715740 | Leaf | 36.464 |
| SRR9715741 | Leaf | 17.471 |
| SRR9715739 | Root | 3.415 |
| SRR9715742 | Root | 3.436 |
| SRR9715743 | Root | 3.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.166 |
| SRR8749028 | MeJA induced 9h | 2.213 |
| SRR8749029 | MeJA induced 9h | 1.909 |
| SRR8749030 | Uninduced | 1.623 |
| SRR8749031 | Uninduced | 0.135 |
| SRR8749032 | Uninduced | 0.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.052 |
| SRR8400027 | Control - Root | 5.359 |