Gene detail information of Glyur000062s00005451 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G19110.3 | 1.00E-18 | Protein kinase superfamily protein |
| NR | KHN47645.1 | 3.95E-51 | Cyclin-dependent kinase F-4, partial [Glycine soja] |
| trEMBL | tr|I1MMJ8|I1MMJ8_SOYBN | 2.00E-51 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G17580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 263 | 1243 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.298 |
| SRR1783600 | control | 27.576 |
| SRR1783602 | moderate drought stress | 28.944 |
| SRR1811619 | moderate drought stress | 27.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.503 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.834 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.940 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.067 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.265 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.325 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.716 |
| SRR2868004 | Drought Stress (root) | 7.321 |
| SRR2967015 | Control (root) | 8.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.572 |
| SRR9715740 | Leaf | 7.059 |
| SRR9715741 | Leaf | 11.021 |
| SRR9715739 | Root | 1.370 |
| SRR9715742 | Root | 8.193 |
| SRR9715743 | Root | 7.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.530 |
| SRR8749028 | MeJA induced 9h | 1.955 |
| SRR8749029 | MeJA induced 9h | 3.636 |
| SRR8749030 | Uninduced | 5.913 |
| SRR8749031 | Uninduced | 6.732 |
| SRR8749032 | Uninduced | 9.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.055 |
| SRR8400027 | Control - Root | 26.160 |