Gene detail information of Glyur000061s00006570 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24577.1 | 2.00E-04 | |
| NR | XP_003629642.1 | 5.04E-31 | hypothetical protein MTR_8g083460 [Medicago truncatula] |
| trEMBL | tr|G7LH59|G7LH59_MEDTR | 2.00E-31 | Uncharacterized protein {ECO:0000313|EMBL:AET04118.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00061 | 380848 | 381105 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.679 |
| SRR1783600 | control | 4.310 |
| SRR1783602 | moderate drought stress | 22.090 |
| SRR1811619 | moderate drought stress | 24.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.597 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.914 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.866 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.914 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.989 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.325 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 60.178 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 57.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.929 |
| SRR2868004 | Drought Stress (root) | 5.642 |
| SRR2967015 | Control (root) | 7.654 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.673 |
| SRR9715740 | Leaf | 68.872 |
| SRR9715741 | Leaf | 38.502 |
| SRR9715739 | Root | 5.808 |
| SRR9715742 | Root | 9.190 |
| SRR9715743 | Root | 8.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.274 |
| SRR8749028 | MeJA induced 9h | 2.941 |
| SRR8749029 | MeJA induced 9h | 2.180 |
| SRR8749030 | Uninduced | 0.123 |
| SRR8749031 | Uninduced | 0.498 |
| SRR8749032 | Uninduced | 1.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.913 |
| SRR8400027 | Control - Root | 4.680 |