Gene detail information of Glyur000061s00006564 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16070.1 | 8.00E-12 | |
| NR | XP_003630798.1 | 7.08E-78 | hypothetical protein MTR_8g103530 [Medicago truncatula] |
| trEMBL | tr|G7L8X4|G7L8X4_MEDTR | 3.00E-78 | Uncharacterized protein {ECO:0000313|EMBL:AET05274.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00061 | 356361 | 357044 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.731 |
| SRR1783600 | control | 1.751 |
| SRR1783602 | moderate drought stress | 2.628 |
| SRR1811619 | moderate drought stress | 2.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.006 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.649 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.565 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.824 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.544 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.720 |
| SRR2868004 | Drought Stress (root) | 7.096 |
| SRR2967015 | Control (root) | 10.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.195 |
| SRR9715740 | Leaf | 0.074 |
| SRR9715741 | Leaf | 0.167 |
| SRR9715739 | Root | 0.234 |
| SRR9715742 | Root | 1.229 |
| SRR9715743 | Root | 0.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.885 |
| SRR8749028 | MeJA induced 9h | 0.746 |
| SRR8749029 | MeJA induced 9h | 0.931 |
| SRR8749030 | Uninduced | 0.391 |
| SRR8749031 | Uninduced | 0.112 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.191 |
| SRR8400027 | Control - Root | 8.033 |