Gene detail information of Glyur000061s00006562.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19650.1 | 6.00E-24 | ovate family protein 8 |
| NR | XP_003530571.1 | 3.69E-102 | PREDICTED: uncharacterized protein LOC100776613 [Glycine max] |
| Swissprot | tr|Q3E9B4|OFP8_ARATH | 1.00E-27 | Transcription repressor OFP8 |
| trEMBL | tr|I1KQ18|I1KQ18_SOYBN | 1.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G04290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00061 | 350293 | 351183 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000061s00006562.1 | PF04844.8 | Ovate | 235 | 293 | 7.30E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.593 |
| SRR1783600 | control | 5.762 |
| SRR1783602 | moderate drought stress | 8.003 |
| SRR1811619 | moderate drought stress | 8.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.212 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.746 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.180 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.744 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.609 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.497 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.494 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.095 |
| SRR2868004 | Drought Stress (root) | 16.155 |
| SRR2967015 | Control (root) | 18.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.254 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.147 |
| SRR9715739 | Root | 3.876 |
| SRR9715742 | Root | 3.663 |
| SRR9715743 | Root | 4.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 70.484 |
| SRR8749028 | MeJA induced 9h | 12.281 |
| SRR8749029 | MeJA induced 9h | 21.574 |
| SRR8749030 | Uninduced | 1.327 |
| SRR8749031 | Uninduced | 0.965 |
| SRR8749032 | Uninduced | 1.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.042 |
| SRR8400027 | Control - Root | 15.306 |