Gene detail information of Glyur000061s00006550 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46225.3 | 6.00E-20 | ABI-1-like 1 |
| NR | XP_003525272.1 | 2.96E-116 | PREDICTED: probable protein ABIL5-like [Glycine max] |
| Swissprot | tr|Q5JMF2|ABIL5_ORYSJ | 8.00E-26 | Probable protein ABIL5 |
| trEMBL | tr|I1K5V6|I1K5V6_SOYBN | 1.00E-116 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G35520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00061 | 293397 | 295720 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.028 |
| SRR1783600 | control | 29.367 |
| SRR1783602 | moderate drought stress | 12.819 |
| SRR1811619 | moderate drought stress | 12.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 72.282 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 72.261 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.098 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.888 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.611 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.778 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.224 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.393 |
| SRR2868004 | Drought Stress (root) | 4.806 |
| SRR2967015 | Control (root) | 6.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.276 |
| SRR9715740 | Leaf | 0.107 |
| SRR9715741 | Leaf | 0.456 |
| SRR9715739 | Root | 1.698 |
| SRR9715742 | Root | 9.122 |
| SRR9715743 | Root | 6.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.383 |
| SRR8749028 | MeJA induced 9h | 0.409 |
| SRR8749029 | MeJA induced 9h | 0.139 |
| SRR8749030 | Uninduced | 0.311 |
| SRR8749031 | Uninduced | 0.131 |
| SRR8749032 | Uninduced | 0.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 75.191 |
| SRR8400027 | Control - Root | 71.348 |