Gene detail information of Glyur000061s00006537 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29100.1 | 2.00E-44 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | KHN41646.1 | 2.46E-143 | Transcription factor bHLH68 [Glycine soja] |
| Swissprot | tr|Q8S3D1|BH068_ARATH | 3.00E-58 | Transcription factor bHLH68 |
| trEMBL | tr|I1K5W7|I1K5W7_SOYBN | 4.00E-143 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G35610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00061 | 223302 | 241315 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.430 |
| SRR1783600 | control | 23.714 |
| SRR1783602 | moderate drought stress | 21.748 |
| SRR1811619 | moderate drought stress | 22.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 47.246 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.009 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 48.214 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.453 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.321 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.924 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.328 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.567 |
| SRR2868004 | Drought Stress (root) | 74.254 |
| SRR2967015 | Control (root) | 89.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.821 |
| SRR9715740 | Leaf | 5.233 |
| SRR9715741 | Leaf | 7.770 |
| SRR9715739 | Root | 24.618 |
| SRR9715742 | Root | 27.751 |
| SRR9715743 | Root | 26.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.035 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.090 |
| SRR8749031 | Uninduced | 0.019 |
| SRR8749032 | Uninduced | 0.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 84.559 |
| SRR8400027 | Control - Root | 64.270 |