Gene detail

Gene detail information of Glyur000061s00006519

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G77210.2	0	sugar transporter 14
NR	XP_004503463.1	0	PREDICTED: sugar transport protein 14-like [Cicer arietinum]
COG	YP_006180545.1	2.00E-68	MFS-type transporter [Halobacillus halophilus DSM 2266]
Swissprot	tr\|Q8GW61\|STP14_ARATH	0	Sugar transport protein 14
trEMBL	tr\|V7CTT1\|V7CTT1_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW32301.1}

Sequence

Transcript Sequence

>Glyur000061s00006519.1
GAGAACAGAACGAACACTGACACACAGAGAGAGAGAGAAGTCAGAGTGAGTGATGGCTGGTGGAGTATTGGCAGATGGAGGGCCAGGCAAAAGGGCTCATCTTTATGAGCACAGGTTCACGGCCTATTTGGCCTTTACATGTGTTGTTGGAGCTCTTGGTGGTTCTCTTTTTGGTTATGATCTCGGTGTTTCAGGTGGGGTGACATCAATGGATGATTTCCTAATAGAATTCTTCCCTGACGTGTACAGAAAGAAGCATAAGCATCTGAATGAGACAGACTACTGTAAATATGACAACCAAGTGCTGACACTGTTTACATCATCTCTTTATTTCTCCGCACTGATTATGACATTCTTTGCTTCCTACATAACAAGAAAGAAAGGGAGAAAGGCCAGTATCATAGTTGGTGCCCTTAGCTTTCTGGCTGGAGCAATCCTCAATGCAGCTGCAAAGAACATTGCAATGCTAATCATTGGCAGGGTCCTTCTTGGTGGAGGCATTGGCTTTGGTAACCAAGCTGTTCCCTTGTATCTATCTGAAATGGCTCCAGCTAAAAACNGAGGAGCAGTTAACCAACTGTTTCAGTTCACAACCTGTGCTGGAATCTTAATTGCAAACCTGGTGAATTATTTCACTGACAAAATCCATCCACATGGTTGGAGAATATCACTGGGTCTGGCAGGTATTCCAGCAATTCTNATGCTTTTGGGAGGTATTTTTTGTGCTGAGACACCCAACAGCCTTGTGGAGCAAGGAAGANTGGATGAGGCAAGAAAGGTGTTAGAGAGAGTNAGAGGTACCAAGAATGTTGAAGCTGAGTTTGAAGATCTAAAAGATGCCAGTGAAGCAGCACAAGCTGTCAAGAGCCCATTTAGGACACTCCTCAAGAGGAAGTACAGGCCCCAGCTAGTAATCGGCGCCTTGGGGATTCCGGCGTTCCAGCAGTTAACCGGCAACAACTCCATCCTCTTCTATGCCCCTGTCATCTTCCAGAGTTTGGGGTTTGGAGCCAATGCATCTTTGTTTTCATCTTTTATTACCAATGGAGCTCTCCTTGTCGCCACGGTCATCTCAATGTTTTTAGTTGACAAGTTTGGTAGAAGAAAATTCTTCCTGGAAGCTGGTTGTGAAATGATATGCTGCATGGTTGCTACGGCTGTGGTTTTGGCTCTGGAGTTTGGACATGGCAAAGAACTTTCAAAAGGCATCAGTTACTTTCTTGTTGTAGTGATTTTCTTGTTTGTCTTGGCATATGGAAGATCTTGGGGTCCTCTGGGGTGGTTGGTCCCAAGTGAGCTCTTCCCATTAGAGATAAGGTCAGCTGCACAGAGTGTTGTGGTGTGTGTCAACATGATCTTCACAGCACTTGTTGCACAGTTGTTCCTCATGTCACTTTGTCACCTGAAATATGGAATCTTCTTGCTGTTTGCTGGCTTAATTGTCATCATGAGTTGCTTTGTCTTCTTTCTCTTGCCCGAAACCAAGCAAGTTCCAATTGAAGAGATCTATCTTCTCTTTGAGAACCATTGGTTCTGGAAGAAGGTTATAAGAGAGGGGNCAGACCAAGAGACATCAAACGGGAAGCCATCAGCTGTTTAAAATTCTCAACAAATTAGATTGATCAAGTCTAGGATTATCTTTTTTTGTTGTCGATGTTTTATTTATGCTTGCATTATAAACAATAAGTAGAATACAACATTTCTTTTAAGATTGGTTGGATCGGTTCGTTCAATATGTATTTAATCTCTTTCATCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00061	108019	111036	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0005215 transporter activity

GO:0022857 transmembrane transporter activity

GO:0022891 substrate-specific transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000061s00006519.1	PF00083.19	Sugar_tr	30	486	1.10E-116

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.285
SRR1783600	control	9.099
SRR1783602	moderate drought stress	6.109
SRR1811619	moderate drought stress	6.066

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.982
DRR006520	Root Summer glycyrrhizin high producing strain	11.899
DRR006521	Root Winter glycyrrhizin high producing strain	5.630
DRR006522	Root Winter glycyrrhizin high producing strain	5.426
DRR006523	Root Summer glycyrrhizin low producing strain	8.288
DRR006524	Root Summer glycyrrhizin low producing strain	8.154
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.227
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.216

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	39.696
SRR2868004	Drought Stress (root)	81.243
SRR2967015	Control (root)	105.916

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.756
SRR9715740	Leaf	8.165
SRR9715741	Leaf	9.796
SRR9715739	Root	15.057
SRR9715742	Root	9.309
SRR9715743	Root	11.066

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	29.409
SRR8749028	MeJA induced 9h	60.744
SRR8749029	MeJA induced 9h	38.201
SRR8749030	Uninduced	31.651
SRR8749031	Uninduced	61.299
SRR8749032	Uninduced	32.892

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.877
SRR8400027	Control - Root	30.287