Gene detail information of Glyur000061s00006513.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19670.1 | 0 | Exostosin family protein |
| NR | XP_003524401.1 | 0 | PREDICTED: probable glycosyltransferase At5g03795-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9FFN2|GLYT3_ARATH | 2.00E-98 | Probable glycosyltransferase At5g03795 |
| trEMBL | tr|K7KRQ4|K7KRQ4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G35730.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00061 | 91895 | 95629 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT47 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000061s00006513.1 | PF03016.10 | Exostosin | 396 | 678 | 7.30E-58 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.410 |
| SRR1783600 | control | 24.610 |
| SRR1783602 | moderate drought stress | 25.889 |
| SRR1811619 | moderate drought stress | 25.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.694 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.502 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.300 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.267 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.643 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.356 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.444 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.965 |
| SRR2868004 | Drought Stress (root) | 11.150 |
| SRR2967015 | Control (root) | 14.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.101 |
| SRR9715740 | Leaf | 2.559 |
| SRR9715741 | Leaf | 2.395 |
| SRR9715739 | Root | 3.139 |
| SRR9715742 | Root | 13.073 |
| SRR9715743 | Root | 11.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.267 |
| SRR8749028 | MeJA induced 9h | 8.391 |
| SRR8749029 | MeJA induced 9h | 5.532 |
| SRR8749030 | Uninduced | 2.575 |
| SRR8749031 | Uninduced | 1.515 |
| SRR8749032 | Uninduced | 1.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.042 |
| SRR8400027 | Control - Root | 14.051 |