Gene detail

Gene detail information of Glyur000061s00006511

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G44970.1	4.00E-129	alpha/beta-Hydrolases superfamily protein
NR	AET05218.2	0	alpha/beta-hydrolase domain protein [Medicago truncatula]
COG	YP_005372263.1	2.00E-37	hypothetical protein COCOR_06310 [Corallococcus coralloides DSM 2259]
trEMBL	tr\|G7L850\|G7L850_MEDTR	0	Alpha/beta-hydrolase domain protein {ECO:0000313\|EMBL:AET05218.2}

Sequence

Transcript Sequence

>Glyur000061s00006511.1
ATGGATGACATACTCACCAATATTTTGAGATTGACAAGTTATATTAGTGATCGATTTATAAAATTTATAGAGGATCTAGTACTAAGAGATGCAGTTAGGTACACACAAAATTTTGGGGTCACTCCAGTGCTCATCTCTTCAGTACACAGTTCAAATGGTTATATTAGAAGCACATCTTTGCAGCCTCCTCAGGTTGGAGGTGAAAACCATGAAATCTGTGAAAGAAGAGCCTTTAACAATAGTAGAGAACTGTTTGTAGATACGAGATCTNTAATTACAAATGCCAGTTATGTCTCTGCAGCTGTTCCTTCACTTTTATTAAAAGGTTTGACACTCCCATTACTTGGTCTACAATGTGCTTGGAGATTGGGAATGGCCTCTTGCAGATATTCTTTCTCATGCATTAGATGTGCTCATGTCCATATTCATAGAACTACATCTCGTGTGTTGAAAACCTTGCGTGGTTCTTCTGATGATATTGGGTGGTTGCAGCATGCTCCTGGATTNCCTCTAGTACAGGATGGAACTTCAAGATTCTTGGAATTGCTTTCAGACATAAGGAATGGAAAGCATTCACTACCCAGTTCATTTGTTTATCTGCTGATTCCAGGTCTCTTTAGCAATCATGGACCCTTGTATTTTGTTGCCACTAAGAGATTCTTTTCAAAGATGGGTTTAGCTTGCCATATTGCAAAAGTTCATAGTGAGGCATCAGTAGAACACAATGCCATGGAACTCAAACTGTATATTGAGGAGATATACTGGGGTTCTGGCAAACCTGTCATGCTACTGGGACACAGCAAGGGTGGTATTGATGCTGCAGCTGCGTTGTCTATGTATTGGTCTGACCTGAAGGACAAAGTTGCTGGATTAGCACTGGTACAGAGTCCATATGGTGGCACCCCCATAGCTTCTGATATCCTCCGTGAAGGCCAGATTGGTGACAAAAAAACCCGGAGGATCTTGGAACTAATAATATGCAAAATAATTAAGGGCGACATTCGGGCATTGGAGGATCTCACATATGAGAAGAGGAAGGAGTTCATCATGAAGCACAAGCTCCCCCTGGATATTCCTGTGATCTCCTTCCATTCTGAAGCAAGCATTGCCCCTAGTGTCATTCTGAAGCAAGCATTGCCCCTAATAGCTCATGCAGAACTTCCCTGGCTCGTTCTACCGAAATTTGGGGTGAAGGAGTCTGATCCATTAATCGAATCAAGTCACCAAGTTCCTGTTATGATTCCTGTATCTGCTGCAATGGCTGTTTGTGCTCTCCACCTGCAGCTGAGATATGGAGAAAAGAGTGATGGACTAGTGACATGCCANGACGCCGAGGTTCCGGGATCGGTTGTTGTAAGGCCCAATATGAAGCTTGATCATGCATGGATGGTGTACTCTTCAAAGNAGAAGAATCCTACTGAACCTGATGCTCGTGAAATGTGTGAAGCTCTATTGACCTTACTTGTAGAGCTTGGTAAGACAAAAAGGGAGGTGGAACAAGTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00061	86529	89651	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.629
SRR1783600	control	0.786
SRR1783602	moderate drought stress	1.769
SRR1811619	moderate drought stress	1.529

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.028
DRR006520	Root Summer glycyrrhizin high producing strain	1.037
DRR006521	Root Winter glycyrrhizin high producing strain	1.418
DRR006522	Root Winter glycyrrhizin high producing strain	1.211
DRR006523	Root Summer glycyrrhizin low producing strain	0.486
DRR006524	Root Summer glycyrrhizin low producing strain	0.456
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.845
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.700

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.688
SRR2868004	Drought Stress (root)	20.489
SRR2967015	Control (root)	30.405

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.263
SRR9715740	Leaf	1.132
SRR9715741	Leaf	1.197
SRR9715739	Root	0.499
SRR9715742	Root	0.417
SRR9715743	Root	1.173

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.883
SRR8749028	MeJA induced 9h	4.747
SRR8749029	MeJA induced 9h	2.404
SRR8749030	Uninduced	2.270
SRR8749031	Uninduced	2.153
SRR8749032	Uninduced	4.362

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.759
SRR8400027	Control - Root	2.394