Gene detail information of Glyur000061s00006510 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11590.1 | 6.00E-41 | Integrase-type DNA-binding superfamily protein |
| NR | XP_004503470.1 | 3.08E-94 | PREDICTED: dehydration-responsive element-binding protein 3-like [Cicer arietinum] |
| Swissprot | tr|Q9LYD3|DREB3_ARATH | 2.00E-56 | Dehydration-responsive element-binding protein 3 |
| trEMBL | tr|V7CTS7|V7CTS7_PHAVU | 4.00E-91 | Uncharacterized protein {ECO:0000313|EMBL:ESW32296.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00061 | 79747 | 80523 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000061s00006510.1 | PF00847.15 | AP2 | 49 | 99 | 1.00E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.398 |
| SRR1783600 | control | 1.572 |
| SRR1783602 | moderate drought stress | 3.593 |
| SRR1811619 | moderate drought stress | 4.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.633 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.603 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.287 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.273 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.567 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.347 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.481 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.258 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.275 |
| SRR2868004 | Drought Stress (root) | 1.172 |
| SRR2967015 | Control (root) | 1.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.944 |
| SRR9715740 | Leaf | 1.344 |
| SRR9715741 | Leaf | 0.377 |
| SRR9715739 | Root | 10.319 |
| SRR9715742 | Root | 11.187 |
| SRR9715743 | Root | 10.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.926 |
| SRR8749028 | MeJA induced 9h | 15.028 |
| SRR8749029 | MeJA induced 9h | 19.276 |
| SRR8749030 | Uninduced | 2.523 |
| SRR8749031 | Uninduced | 1.131 |
| SRR8749032 | Uninduced | 9.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.905 |
| SRR8400027 | Control - Root | 1.894 |