Gene detail information of Glyur000060s00004779 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00500.2 | 2.00E-174 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003521000.1 | 0 | PREDICTED: uncharacterized protein LOC100800227 [Glycine max] |
| trEMBL | tr|I1JK88|I1JK88_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G01200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00060 | 419610 | 424086 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000060s00004779.1 | PF03893.11 | Lipase3_N | 65 | 129 | 6.40E-20 |
| Glyur000060s00004779.1 | PF01764.20 | Lipase_3 | 176 | 298 | 5.40E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.889 |
| SRR1783600 | control | 13.769 |
| SRR1783602 | moderate drought stress | 18.701 |
| SRR1811619 | moderate drought stress | 18.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.047 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.256 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.447 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.166 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.686 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.175 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.973 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.444 |
| SRR2868004 | Drought Stress (root) | 46.313 |
| SRR2967015 | Control (root) | 44.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.487 |
| SRR9715740 | Leaf | 39.832 |
| SRR9715741 | Leaf | 42.255 |
| SRR9715739 | Root | 11.505 |
| SRR9715742 | Root | 16.862 |
| SRR9715743 | Root | 18.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.465 |
| SRR8749028 | MeJA induced 9h | 8.975 |
| SRR8749029 | MeJA induced 9h | 5.765 |
| SRR8749030 | Uninduced | 12.276 |
| SRR8749031 | Uninduced | 7.624 |
| SRR8749032 | Uninduced | 6.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.698 |
| SRR8400027 | Control - Root | 45.693 |