Gene detail information of Glyur000060s00004765 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00440.1 | 9.00E-97 | Protein of unknown function (DUF3741) |
| NR | KHN26963.1 | 0 | hypothetical protein glysoja_031040 [Glycine soja] |
| trEMBL | tr|I1KIA0|I1KIA0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G07680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00060 | 351562 | 357419 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000060s00004765.1 | PF12552.3 | DUF3741 | 218 | 263 | 4.20E-13 |
| Glyur000060s00004765.1 | PF14309.1 | DUF4378 | 767 | 914 | 9.60E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.943 |
| SRR1783600 | control | 6.845 |
| SRR1783602 | moderate drought stress | 8.307 |
| SRR1811619 | moderate drought stress | 8.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.523 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.392 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.354 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.183 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.693 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.862 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.269 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.888 |
| SRR2868004 | Drought Stress (root) | 29.734 |
| SRR2967015 | Control (root) | 24.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.846 |
| SRR9715740 | Leaf | 5.841 |
| SRR9715741 | Leaf | 6.145 |
| SRR9715739 | Root | 1.321 |
| SRR9715742 | Root | 10.836 |
| SRR9715743 | Root | 9.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.256 |
| SRR8749028 | MeJA induced 9h | 27.463 |
| SRR8749029 | MeJA induced 9h | 19.863 |
| SRR8749030 | Uninduced | 41.887 |
| SRR8749031 | Uninduced | 45.430 |
| SRR8749032 | Uninduced | 25.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.076 |
| SRR8400027 | Control - Root | 18.882 |