Gene detail information of Glyur000060s00004764 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01690.1 | 4.00E-47 | putative recombination initiation defects 3 |
| NR | XP_006583295.1 | 0 | PREDICTED: protein PAIR1-like isoform X2 [Glycine max] |
| Swissprot | tr|Q75RY2|PAIR1_ORYSJ | 3.00E-18 | Protein PAIR1 |
| trEMBL | tr|K7L059|K7L059_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G07665.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00060 | 338801 | 345264 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.126 |
| SRR1783600 | control | 1.165 |
| SRR1783602 | moderate drought stress | 0.446 |
| SRR1811619 | moderate drought stress | 0.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.817 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.828 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.027 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.733 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.793 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.534 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.028 |
| SRR2868004 | Drought Stress (root) | 1.392 |
| SRR2967015 | Control (root) | 1.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.808 |
| SRR9715740 | Leaf | 1.576 |
| SRR9715741 | Leaf | 1.144 |
| SRR9715739 | Root | 0.104 |
| SRR9715742 | Root | 0.067 |
| SRR9715743 | Root | 0.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.791 |
| SRR8749028 | MeJA induced 9h | 6.918 |
| SRR8749029 | MeJA induced 9h | 4.648 |
| SRR8749030 | Uninduced | 2.903 |
| SRR8749031 | Uninduced | 2.119 |
| SRR8749032 | Uninduced | 1.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.882 |
| SRR8400027 | Control - Root | 1.476 |