Gene detail information of Glyur000060s00004754 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00370.1 | 0 | Major facilitator superfamily protein |
| NR | XP_004510775.1 | 0 | PREDICTED: probable anion transporter 2, chloroplastic-like [Cicer arietinum] |
| COG | YP_003588376.1 | 4.00E-62 | major facilitator superfamily protein [Kyrpidia tusciae DSM 2912] |
| Swissprot | tr|Q8GX78|ANTR2_ARATH | 0 | Probable anion transporter 2, chloroplastic (Precursor) |
| trEMBL | tr|I1KI91|I1KI91_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G07570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00060 | 281119 | 287494 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000060s00004754.1 | PF07690.11 | MFS_1 | 202 | 560 | 1.00E-61 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.457 |
| SRR1783600 | control | 3.461 |
| SRR1783602 | moderate drought stress | 2.958 |
| SRR1811619 | moderate drought stress | 2.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.477 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.282 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.797 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.779 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.344 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.370 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.438 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.888 |
| SRR2868004 | Drought Stress (root) | 6.531 |
| SRR2967015 | Control (root) | 6.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.233 |
| SRR9715740 | Leaf | 39.485 |
| SRR9715741 | Leaf | 18.506 |
| SRR9715739 | Root | 2.004 |
| SRR9715742 | Root | 3.502 |
| SRR9715743 | Root | 2.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.066 |
| SRR8749028 | MeJA induced 9h | 6.907 |
| SRR8749029 | MeJA induced 9h | 5.151 |
| SRR8749030 | Uninduced | 1.224 |
| SRR8749031 | Uninduced | 0.470 |
| SRR8749032 | Uninduced | 1.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.318 |
| SRR8400027 | Control - Root | 22.584 |