Gene detail information of Glyur000060s00004716 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37010.1 | 5.00E-13 | |
| NR | KHN18623.1 | 0 | hypothetical protein glysoja_033730 [Glycine soja] |
| Swissprot | tr|Q5XVH5|Y1710_ARATH | 2.00E-32 | Uncharacterized protein At1g65710 {ECO:0000305} |
| trEMBL | tr|K7MPZ1|K7MPZ1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G05470.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00060 | 71613 | 73935 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.886 |
| SRR1783600 | control | 0.902 |
| SRR1783602 | moderate drought stress | 0.667 |
| SRR1811619 | moderate drought stress | 0.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.781 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.860 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.301 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.282 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.589 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.547 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.845 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.057 |
| SRR2868004 | Drought Stress (root) | 1.309 |
| SRR2967015 | Control (root) | 1.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.477 |
| SRR9715740 | Leaf | 0.246 |
| SRR9715741 | Leaf | 0.841 |
| SRR9715739 | Root | 0.290 |
| SRR9715742 | Root | 0.866 |
| SRR9715743 | Root | 0.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.683 |
| SRR8749028 | MeJA induced 9h | 1.134 |
| SRR8749029 | MeJA induced 9h | 0.924 |
| SRR8749030 | Uninduced | 0.789 |
| SRR8749031 | Uninduced | 0.356 |
| SRR8749032 | Uninduced | 0.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.935 |
| SRR8400027 | Control - Root | 4.407 |