Gene detail information of Glyur000060s00004715 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02690.1 | 1.00E-116 | nodulin MtN21 /EamA-like transporter family protein |
| NR | XP_003552900.1 | 0 | PREDICTED: WAT1-related protein At3g02690, chloroplastic-like [Glycine max] |
| COG | YP_007122809.1 | 1.00E-97 | DMT(drug/metabolite transporter) superfamily permease [Microcoleus sp. PCC 7113] |
| Swissprot | tr|Q93V85|WTR16_ARATH | 5.00E-160 | WAT1-related protein At3g02690, chloroplastic (Precursor) |
| trEMBL | tr|K7MPZ0|K7MPZ0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G05460.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00060 | 67081 | 70940 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000060s00004715.1 | PF00892.15 | EamA | 128 | 250 | 2.30E-20 |
| Glyur000060s00004715.1 | PF00892.15 | EamA | 279 | 406 | 2.10E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.203 |
| SRR1783600 | control | 13.112 |
| SRR1783602 | moderate drought stress | 13.170 |
| SRR1811619 | moderate drought stress | 13.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.993 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.974 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.475 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.295 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.341 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.377 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.760 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.783 |
| SRR2868004 | Drought Stress (root) | 23.182 |
| SRR2967015 | Control (root) | 23.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.330 |
| SRR9715740 | Leaf | 35.676 |
| SRR9715741 | Leaf | 25.147 |
| SRR9715739 | Root | 15.320 |
| SRR9715742 | Root | 16.616 |
| SRR9715743 | Root | 18.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.831 |
| SRR8749028 | MeJA induced 9h | 6.300 |
| SRR8749029 | MeJA induced 9h | 2.288 |
| SRR8749030 | Uninduced | 1.982 |
| SRR8749031 | Uninduced | 0.444 |
| SRR8749032 | Uninduced | 0.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.187 |
| SRR8400027 | Control - Root | 21.739 |