Gene detail information of Glyur000060s00004699 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14430.1 | 2.00E-09 | |
| NR | XP_010245964.1 | 4.08E-26 | PREDICTED: uncharacterized protein LOC104589364 [Nelumbo nucifera] |
| trEMBL | tr|A0A068U6S0|A0A068U6S0_COFCA | 5.00E-26 | Coffea canephora DH200=94 genomic scaffold, scaffold_12 {ECO:0000313|EMBL:CDP04215.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00060 | 16459 | 19119 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.014 |
| SRR1783600 | control | 26.403 |
| SRR1783602 | moderate drought stress | 24.919 |
| SRR1811619 | moderate drought stress | 24.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.289 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.740 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 92.582 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 90.345 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.273 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 43.857 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.406 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 98.763 |
| SRR2868004 | Drought Stress (root) | 107.818 |
| SRR2967015 | Control (root) | 100.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 54.842 |
| SRR9715740 | Leaf | 56.012 |
| SRR9715741 | Leaf | 59.215 |
| SRR9715739 | Root | 45.386 |
| SRR9715742 | Root | 38.086 |
| SRR9715743 | Root | 39.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 75.462 |
| SRR8749028 | MeJA induced 9h | 55.299 |
| SRR8749029 | MeJA induced 9h | 72.485 |
| SRR8749030 | Uninduced | 64.009 |
| SRR8749031 | Uninduced | 30.950 |
| SRR8749032 | Uninduced | 54.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 62.215 |
| SRR8400027 | Control - Root | 62.176 |