Gene detail information of Glyur000060s00004695 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37020.1 | 2.00E-50 | auxin response factor 8 |
| NR | XP_004500428.1 | 1.66E-174 | PREDICTED: auxin response factor 8-like [Cicer arietinum] |
| Swissprot | tr|Q9FGV1|ARFH_ARATH | 5.00E-59 | Auxin response factor 8 |
| trEMBL | tr|K7KAF4|K7KAF4_SOYBN | 9.00E-172 | Auxin response factor {ECO:0000256|RuleBase:RU004561} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00060 | 1859 | 8882 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.769 |
| SRR1783600 | control | 27.649 |
| SRR1783602 | moderate drought stress | 30.297 |
| SRR1811619 | moderate drought stress | 30.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.182 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 37.330 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.580 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.128 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.106 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.725 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.323 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.970 |
| SRR2868004 | Drought Stress (root) | 17.450 |
| SRR2967015 | Control (root) | 21.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.322 |
| SRR9715740 | Leaf | 6.478 |
| SRR9715741 | Leaf | 10.384 |
| SRR9715739 | Root | 7.725 |
| SRR9715742 | Root | 23.328 |
| SRR9715743 | Root | 17.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.903 |
| SRR8749028 | MeJA induced 9h | 20.648 |
| SRR8749029 | MeJA induced 9h | 14.814 |
| SRR8749030 | Uninduced | 6.265 |
| SRR8749031 | Uninduced | 3.178 |
| SRR8749032 | Uninduced | 5.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.647 |
| SRR8400027 | Control - Root | 29.086 |