Gene detail

Gene detail information of Glyur000059s00006333

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G34300.1	3.00E-58	lectin protein kinase family protein
NR	KHN15348.1	0	Receptor like protein kinase S.2 [Glycine soja]
COG	YP_007321265.1	1.00E-15	serine/threonine protein kinase, bacterial [Fibrella aestuarina BUZ 2]
Swissprot	tr\|Q9XID3\|Y1343_ARATH	5.00E-63	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 (Precursor)
trEMBL	tr\|K7MBP9\|K7MBP9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G17460.2}

Sequence

Transcript Sequence

>Glyur000059s00006333.1
CTTCCTCACTATATCACCTTAGCATTTTGAATTCTCAATTATCTCTTGTCTAATGTCATCCTCGAGTGGTGGTACACTTGAGATTGTTGTAATCGTGGTTGTAGTTGTTGTGAAGATAGGTATTTTGGTTTGTGTGTGCAGAAAAAGGCTTCAAATCAAAGGTGGACCTATTGGTCCAGACTCAAAATTCATAACACTCACTTTGGGTAAATTCCTGAATGACATGGAAAGGGAAAAGCCAATCAGATTCAGTGATCAACAACTAAGGATAGCAACCGATAACTACTCCAACTTGCTATATGGATTCTGCTGTGAAAGAAACTTGATGGCTTTGGTTTATGAATACATGGGGAATGGATCACTTGATAGGTACCTTTTTCATGAACAAAAGACCTTAGGATTTGAGAAGCTTCATGAGATTGCAATTGGGACAGCAATGGGAATTGCATACTTGCATGAAGGGTGCCANCAAAGAATAATCCACTATGATATAAAACCAGGAAACATTCTATTAGACAGAAACTATGATCCAAAAGTTGCTGANTTTGGTTTGGCCAAGCTTTGCAATAGAGAAAACACTCACATAACAATGACTGGAGGAAGGGGAACACCTGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTGTGACTCACAAGTGTGATGTTTATAGCTTTGGGATGCTTCTATTTGAGATCATAGGTAGGAGAAGGAACATGGATGCTAAACTTTCTGAGAGCCAAGAATGGTTTCCAATTTGGGTTTGGAAGAAATTTGATGCTGGAAAATTGGGGGAGTCAATGATGATGGATTGTGGAATTGAGGAGAAAAATAGGGAGATTTCAGAGAGAATGGTTAAGGTAGCTCTATGGTGTGTTCAATATAGGCCAGAATCAAGGCCTATGATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCACTTGAAGTTCCAAACCCTTTAAACCCTTTTCAGCATTTGATGGATGAGACTTTTGTTGCTACTGCTCATCCAATCCAAGTGTCACATACCTATAATACAACTAGTGTTTCTTCTGGCTCTTCTTTGGTGGTAAGTAATTCCAGCATTGTATGTGCTACTCCTCTTATGAGGAAGTATGAGATTGAATTAGCATCTAGCATAGGAAGATCTCATGTTGATAGCAGTCCAAACTCAAAAACTCTTCTGACACTTGCCATGGATAAATTTCTGAATGATATNGAAAGAGAGAAACCAATCAGGTTTACCAGTAGTTTCGGACAAGTCTATAGAGGAAGTCTCGGTAANGAAACCGCGGTGGCCGTGAAGGTTCTGCGCGGGAGTTCCGACAAGAGAATCGAGGAGCAGTATATGGCAGAAGTAGGAACAATTGGTAGGATTCACNACTTCAATTTAGTTCAGCTGTATGGATTTTGCTTTGAGAGAGATTTGAGAGCTTTGGTTTATGAGTACATGGGGAATGGTTCCCTTGAAGGGTATCTGTTTCACGAACACAAGACCTTGAGATTTGGAAAGCTTCATGAGATTGCAATTGGGACAGCAAGAGGCATTGCATACCATTACCTGCATGAAGAGTGCAAACAAAGGATAATCCACTATGACATAAAACCAGGAAATGTTCTCTTGGACAACAACTTCGATCCCAAGGTTGCGGATTTCGGTTTGGCCAAGCTTTGCAACAGGGAAAACANTCACATAACCATGACTGGAGGGAGGGGTACACCTGGTTATGCTGCACCGGAGCTTTGGATGCCATTTCCTGTGACTCACAAATGTGATGTGATCTTTGGGATGCTGCTATTTGAAATCATAGGTAGGAGAAGAAACCTTGACACCAACCTTATAGAAAGCCAAGAGTGGTTTCCAATGTGGGCTTGGAGAAGATTTGATGCTGGAGAACTGGAAGAGTTAATAATAGCCTGTGGGATAGAAGAGAAGCATAAGGAGATTGCAGAAAGAATGGCTAAGGTAGCTTTTTCTTGTGTTCAGTATAGGCCAGAATCAAGACCAATGATGAGTGATGTGGTGAAAATGTTGGAAGGTTCAGTTGAAATCCNAAGACCTATGAACCCATTTCAGCAAATGATAGATAGGATTTTGCCAGGTCATCCAGTCCAAACATCACAGACTTCTAATACNAGTACAAACAAGATCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00059	381075	392479	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000059s00006333.1	PF00069.20	Pkinase	82	289	3.40E-31
Glyur000059s00006333.1	PF07714.12	Pkinase_Tyr	400	661	2.10E-35

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.085
SRR1783600	control	0.085
SRR1783602	moderate drought stress	0.123
SRR1811619	moderate drought stress	0.092

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.590
DRR006520	Root Summer glycyrrhizin high producing strain	1.825
DRR006521	Root Winter glycyrrhizin high producing strain	0.051
DRR006522	Root Winter glycyrrhizin high producing strain	0.101
DRR006523	Root Summer glycyrrhizin low producing strain	0.204
DRR006524	Root Summer glycyrrhizin low producing strain	0.230
DRR006525	Leaf Summer glycyrrhizin high producing strain	36.731
DRR006526	Leaf Summer glycyrrhizin high producing strain	36.365

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.161
SRR2868004	Drought Stress (root)	2.659
SRR2967015	Control (root)	2.136

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	103.514
SRR9715740	Leaf	42.932
SRR9715741	Leaf	124.122
SRR9715739	Root	0.000
SRR9715742	Root	2.400
SRR9715743	Root	2.828

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.417
SRR8749028	MeJA induced 9h	0.266
SRR8749029	MeJA induced 9h	0.168
SRR8749030	Uninduced	0.564
SRR8749031	Uninduced	1.461
SRR8749032	Uninduced	0.588

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.927
SRR8400027	Control - Root	4.204