Gene detail

Gene detail information of Glyur000059s00006330

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G30110.1	0	heavy metal atpase 2
NR	XP_004488108.1	0	PREDICTED: putative cadmium/zinc-transporting ATPase HMA4-like isoform X2 [Cicer arietinum]
COG	YP_001099880.1	7.00E-90	cadmium-transporting ATPase [Herminiimonas arsenicoxydans]
Swissprot	tr\|Q9SZW4\|HMA2_ARATH	0	Cadmium/zinc-transporting ATPase HMA2
trEMBL	tr\|G8GVE0\|G8GVE0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G06166.1} (Fragment)

Sequence

Transcript Sequence

>Glyur000059s00006330.1
ATGGTTGATAATATGAAGAGAAGCAACTTTGAAGTGTTGGGAATGTGCTGTGNTACAGAAGCAGCACTGGTTGAAAGAATTCTGATGCCTCTTCATGGAGTCAAAGATGTCTCAGTGATAGTTCCTACCCGAACTGTCACNGTGGGAGAGACCAGTAATGAAAAGAAATGGCCAGACTTAACCACAATGGCCTGTGGCTTGTTACTGGCACTTTCTTTCTTGCAGTATATATATCCCCCTTTGGGATGGTTGGCTCTTGGTTCTGTTGTCATTGGCTTCCCTAGAGTTCTATTTAGGGCCATAGCTTCCATTAAGGCTCTTACTCTTAATATCAACATTCTGGTTCTATTGGCAGTGTGTGGTACTGNTGCTTTACAAGACTTTACAGATGGTGGAGTCATCATCTTCCTATTCTCCATTGCTCAGTGGCTTGAGACAAGAGCAACTCACAAGGCAATGGTTGCAATGTCCTCTTTAACGAGCATGGCTCCTCAAAAGGCCATTGTTGCTGAGACTGGGGAACGTGTTGATGTCAATGATGTTAAGATCAACACCATACTTGCAGTCAAGGCTGGTGATGCTATTCCTCTTGATGGAGTTGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAATCATTCCCTGTCACCAAAGAGTCAGGTTCAGTAGTCTGGGCTGGAACAATTAATCTGAATGCTGCAATAGGTGTTGCTGATATTGAGCCTTGGTTTCATTTGGCAATTGTGGTTTTATTGAGTGGATGCCCTTGTGCTCTCATCCTCTCCACACCTGTTGCAATCTTTTGTGCTCTCACAAAGGCTGCAATAAGTGGATTACTACTGAAAGGTGGAGATTATCTTGAAACACTTTCTGGGATTAAGACAGTGGCTTTTGATAAAACAGGCACAATAACAAGAGGAGAGTTCAGTGTAACAGATTTTTGTGCTGTAGAGGAGGACATTGACATTGAAACCTTATTGNACTGGGTTTCAAGTATTGAGAGTAAATCAAGTCATCCAATGGCAGCTGCACTAGTGGAATATGGAATGTTGCACTCTGTCAAACCAGCCCCTGAAAATGTGGAGAATTTTCAAAATTTCCCAGGGGAAGGAATTTGTGGCAANATTGATGGGAAGGATATCTATATAGGCAATAAGAAAATTGGTGTCAGAGCTGGCTGTGAAAGAGTTGATTGCCACGAGCAATTTCAAAGCCATGAGATTTCTACAAAGAAACAATATTGTGGACCAACTCTAGTTGGAGTCTTCAGCCTAGTTGACACTTGCAGATCAGGTGCTTTGGAGGCTATAGAAGAGCTNAAGTTATTAGGGGTGAGATCAGCCATGCTGACAGGAGATAGTGCTCAGTTGAACCATGCTATAGACATTGTTCATGCAGAGCTTCTACCCCATGAAAAGGCAATGATCATTGAGAATTTCAAGAAAGATGGGCCAACAGCCATGATTGGGGATGGCATCAATGATGCACCTGCATTAGCCACAGCTGACATAGGCATCTCAATGGGAATATCAGGTTCAGCCCTTGCAAATGAGACAGGCAATGCAATTCTCATGTCAAATGACATAAGAAAAGTCCCTGAAGCCATTAGGCTAGCAAGGAGAACTAAAAGAAAGCTCATTGAGAATGTCATCATTGCAATTGGATCCAAGAGTGCCATAATGGCACTGGCAATTGCAGGATACCCTTTGGTTTGGCTTGCTGTGTTGACTGATGTTGGAACCTGTTTACTTGTGATTCTCAATAGCATGCTACTTTTACAAGAGAAACCCAAATATGAAAAAGAATCTACAAGGTCTAAATATGGCAGCAACTTCTTGGAAGATAAAACCAAACCTCTACTTGACAAGCAAAGTAATGATAGTAATAATGTTGTTGATGAGAACAAGTGTGGTAAAGAGTGCTGTGAAAATCTCANTCACCATGTGGGGGCCACAAATGCAAGCAAAGATGAAACCTTTGGACTTAAAAAGTTGAGATTATTCAAGGGAAAAGNCCATGGGAGCTTTGTCTTTGTTGAAGTTCATATAGTGAAGCCTNGCAATGGTTGCTGTTGTTTAGACAAAGTCAAAATGTGTTGTGATGGTGACTCCTCCTCATGCAACAGAACAAAGAATGGTTCTGATGATTGTGGCACTGGATCTGTTAGGAGGACACAAGATGCTGGACATAATAAGGACAAATCTGTAGCTATTTCAGAGTTGTCTGGGACAAGTGGGATTCCTCAGTGCTGCAAGAAAGGGTGCTGTAATGATCCTAGAAGAACAAACATGACTTTTTATTATTATTCTCCTCCTTCCTTCTACTCTTCCTCTGACAATTTTGAGACACAGGCACAAAATACCTTTGACAATTTTGGTAAAAGGGTTGATTCCACTATGAAATGGGCAGTAGCAGAATCTGTAGTATATGGGGTTGTGGTAATAATAGCAATTATAGCAATAGTGTATGCCATCATTGAGTGCTTGAAGAAAGCAGGAACAGCAATTCCAGCTTACACTCAGCTTCCAACCACAGAGAAAGATAACAATAATAANGCCTCAAACTCATTTCCTTCCACCAGCAAAATCCAAGTGGTAATACCCCAAGATTCAAAAGCTGAATTTGCAACCATGGAAAGATTCCTTAGCAACATCAATAGGGAGAAACCAATAAGATTCTCACCTGAGGAACTTGATGGGATTACAAAAAGCTACTCAACCATATTGGGTTCTGGTGCTTTTGGGGTTGTCTTCAAAGGGGAATTGTCCAATGGAGAACATGTGGCAGTCAAANTCCTCAATTGTTTGGATATGGGGATGGAAGAGCAATTCAAAGCTGAAGTTAGCACCATTGGAAGAACTTACCATGTCAATCTAGTAAGACTCTATGGCTTCTGCTTCCACCATGACACAAGAGCTCTTGTTTATGAGTATGTGGAGAATGGTTCTCTAGACAAGTACTTGTTTGGAAGCCAGAACCGCGACGTTGAGTTGGGGAAGCTTCATGAGATTGCAATTGGGACAGCTAAAGGAATTGCTTATTTGCATGAGGAATGTCAACATAGAATAATTCATTATGATATCAAACCGGAGAACGTTCTTCTTAACATGAAATTGGAACCAAAGATAGCGGATTTTGGACTCGCGAAGCTTCGCAGCAGAGAAAGTAACATTGTAGTGAACACGCACTTTAGAGGAACGCGGGGATATGCAGCACCAGAAATGTGGAAGGCTTATCCGGTGACGTACAAGTGTGATGTCTATAGTTTTGGTATTCTTCTCTTTGAAATTGTTGGGAGGAGAAGGCATTTTGATGATAGCTACAATGAGTCACAACAATGGTTTCCAAAATGGACATGGGAGATGTTTGAGAATAATGAATTGGCTGTTATGGTTGCACTTTGTGGAATTGAGGAGAAAGACAATGAGATTGCTGGGAGAATGTTAAAGGTGGCTCTATGGTGTGTTCAGTATTCACCAGATGATAGGCCTCTTATGAGTACTGTGGTTAAGATGTTAGAGGGTGAAATAGAAATTTCTCCACCCCCATTTCCCTTCAAAAATCTGATGTCTGATAAACAAAACTTGACTCCACAGGGAAGCGCTGCGGATTCCGATACTACTACATCGTCGTGGCAGACTGAATCTTCCAGAGAATCTGGTTCCGGAACCAAGCATAATGCATTTCAGATTGAGAAATCTACTTAAATGCATCATAGCAGTACATAGAAAAAAAAATGGTGCTATCAAGCTCCCATCACGAGGAAGAGTCAAACCATTGTGGATGTATCATAAGCAAGTTTATCTTGTATTTGCAAGAAGCTAATTCCACGACTCGAATCCGTGGCTTTCTCATGATTGTAGTAAAATTGAAATTTATTTAATTCATTAGTTTTCAACAAAGTGATGTTTTTTGTACTTTGTTAAATGAAAATACATATTGTGCAGGCCAAACTAAAACTAGTGCCCTCACCTTTGCAGCCTTTTGCAATGGAAGAATCTTGTGTCTTTTATCAAACCAGAATATAGGAGTGAAAGAATGGAACTGAGCTTTATTCTTTGACACATAAGAAATTTCAGATCTTGTTTG

Protein Sequence

>Glyur000059s00006330.1
MVDNMKRSNFEVLGMCCXTEAALVERILMPLHGVKDVSVIVPTRTVTVGETSNEKKWPDLTTMACGLLLALSFLQYIYPPLGWLALGSVVIGFPRVLFRAIASIKALTLNINILVLLAVCGTXALQDFTDGGVIIFLFSIAQWLETRATHKAMVAMSSLTSMAPQKAIVAETGERVDVNDVKINTILAVKAGDAIPLDGVVVEGKCEVDEKMLTGESFPVTKESGSVVWAGTINLNAAIGVADIEPWFHLAIVVLLSGCPCALILSTPVAIFCALTKAAISGLLLKGGDYLETLSGIKTVAFDKTGTITRGEFSVTDFCAVEEDIDIETLLXWVSSIESKSSHPMAAALVEYGMLHSVKPAPENVENFQNFPGEGICGXIDGKDIYIGNKKIGVRAGCERVDCHEQFQSHEISTKKQYCGPTLVGVFSLVDTCRSGALEAIEELKLLGVRSAMLTGDSAQLNHAIDIVHAELLPHEKAMIIENFKKDGPTAMIGDGINDAPALATADIGISMGISGSALANETGNAILMSNDIRKVPEAIRLARRTKRKLIENVIIAIGSKSAIMALAIAGYPLVWLAVLTDVGTCLLVILNSMLLLQEKPKYEKESTRSKYGSNFLEDKTKPLLDKQSNDSNNVVDENKCGKECCENLXHHVGATNASKDETFGLKKLRLFKGKXHGSFVFVEVHIVKPXNGCCCLDKVKMCCDGDSSSCNRTKNGSDDCGTGSVRRTQDAGHNKDKSVAISELSGTSGIPQCCKKGCCNDPRRTNMTFYYYSPPSFYSSSDNFETQAQNTFDNFGKRVDSTMKWAVAESVVYGVVVIIAIIAIVYAIIECLKKAGTAIPAYTQLPTTEKDNNNXASNSFPSTSKIQVVIPQDSKAEFATMERFLSNINREKPIRFSPEELDGITKSYSTILGSGAFGVVFKGELSNGEHVAVKXLNCLDMGMEEQFKAEVSTIGRTYHVNLVRLYGFCFHHDTRALVYEYVENGSLDKYLFGSQNRDVELGKLHEIAIGTAKGIAYLHEECQHRIIHYDIKPENVLLNMKLEPKIADFGLAKLRSRESNIVVNTHFRGTRGYAAPEMWKAYPVTYKCDVYSFGILLFEIVGRRRHFDDSYNESQQWFPKWTWEMFENNELAVMVALCGIEEKDNEIAGRMLKVALWCVQYSPDDRPLMSTVVKMLEGEIEISPPPFPFKNLMSDKQNLTPQGSAADSDTTTSSWQTESSRESGSGTKHNAFQIEKST

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00059	369947	381088	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0030001 metal ion transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0000166 nucleotide binding

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000059s00006330.1	PF00122.15	E1-E2_ATPase	133	237	3.40E-21
Glyur000059s00006330.1	PF00122.15	E1-E2_ATPase	244	293	7.00E-05
Glyur000059s00006330.1	PF00702.21	Hydrolase	297	507	1.20E-34
Glyur000059s00006330.1	PF00069.20	Pkinase	911	1168	6.10E-46

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.557
SRR1783600	control	0.548
SRR1783602	moderate drought stress	0.337
SRR1811619	moderate drought stress	0.303

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.710
DRR006520	Root Summer glycyrrhizin high producing strain	0.708
DRR006521	Root Winter glycyrrhizin high producing strain	0.166
DRR006522	Root Winter glycyrrhizin high producing strain	0.160
DRR006523	Root Summer glycyrrhizin low producing strain	1.838
DRR006524	Root Summer glycyrrhizin low producing strain	1.832
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.771
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.711

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.827
SRR2868004	Drought Stress (root)	18.541
SRR2967015	Control (root)	14.944

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	15.235
SRR9715740	Leaf	14.650
SRR9715741	Leaf	16.033
SRR9715739	Root	0.613
SRR9715742	Root	2.404
SRR9715743	Root	2.137

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.375
SRR8749028	MeJA induced 9h	22.054
SRR8749029	MeJA induced 9h	21.675
SRR8749030	Uninduced	65.870
SRR8749031	Uninduced	89.840
SRR8749032	Uninduced	32.534

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.549
SRR8400027	Control - Root	4.255