Gene detail information of Glyur000059s00006323 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G05310.1 | 4.00E-36 | |
| NR | AFK45342.1 | 3.94E-62 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SYK0|I3SYK0_LOTJA | 1.00E-62 | Uncharacterized protein {ECO:0000313|EMBL:AFK45342.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00059 | 317985 | 319165 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.040 |
| SRR1783600 | control | 0.040 |
| SRR1783602 | moderate drought stress | 0.202 |
| SRR1811619 | moderate drought stress | 0.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.429 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.445 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 229.845 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 227.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.243 |
| SRR2868004 | Drought Stress (root) | 1.160 |
| SRR2967015 | Control (root) | 0.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 74.616 |
| SRR9715740 | Leaf | 123.383 |
| SRR9715741 | Leaf | 66.937 |
| SRR9715739 | Root | 0.055 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.751 |
| SRR8749028 | MeJA induced 9h | 14.280 |
| SRR8749029 | MeJA induced 9h | 8.838 |
| SRR8749030 | Uninduced | 10.554 |
| SRR8749031 | Uninduced | 9.070 |
| SRR8749032 | Uninduced | 24.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.357 |
| SRR8400027 | Control - Root | 0.839 |