Gene detail

Gene detail information of Glyur000059s00006304.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35230.1	0	BR-signaling kinase 1
NR	XP_004491635.1	0	PREDICTED: probable serine/threonine-protein kinase At4g35230-like isoform X2 [Cicer arietinum]
COG	YP_284821.1	1.00E-14	protein kinase:GAF [Dechloromonas aromatica RCB]
Swissprot	tr\|Q944A7\|Y4523_ARATH	0	Probable serine/threonine-protein kinase At4g35230
trEMBL	tr\|G7KFE0\|G7KFE0_MEDTR	0	LRR receptor-like kinase {ECO:0000313\|EMBL:AET01057.2}

Sequence

Transcript Sequence

>Glyur000059s00006304.1
AGTAGATAGAAGAGAGTAGAGAGGGTCCAAGGAAGTCGTGTNAAGTAAATACTCCTACTAGTCTCCTACTAGGGATTTCATTAGATTAGTAAAGTAACAGTAATAGTAATTGGGAAGAATACTTACTGGAATAGAAGGGAAGGAGTAAAAACAAAAATTGGGAGTAATAGAAAGGGAAGAAAATCACTCAATCACGCGTAGCGTACACAAGGGGAAGGCATATACATAAGCAAAGCAAAGCCATGAAGGTGTATGGTGTGGCTGTGTATGTGATCGATCTGTGAGAGAAGCTGATAGAGAGAGAGAGAGAGAGAATTGAGGGATGGGTTGTTGCCAGTCATCGTGCTTGGAGAGATGGAGAGGAGGGGAGAAGAGTAACCCCGAAAAGGAAAACGAAAAGGAAAAGGGAGGACAACCCTATCATTTCCGCGGCCGCAACAACCATCAGAATCAGAATCAAAGTCAGAGCGAGAGCGAGTCGTCGTCGGCAGCAGCAGCAGCAGTGCCTGCGGCGGCGGCTGTTGATCCCTCCTCGTTCACGTTCTCGGAGTTCTCGTTGTCAGACCTGAAAGCGGCGACCAACAATTTCAGCTCGGAGTACATCGTGTCGGAGAGCGGGGAGAAGGCGCCCAACGTCGTCTACAAGGGTCGCCTTCAGCAGCAGAAGCGCTGGATTGCCGTCAAGAAGTTCGGCAAGTCCGCGTGGCCCGATCCCAAGCAATTCGTCGAAGAGGCTTCTGGCGTTGGCAAGTTGCGCCACCCCAGGCTTGCCAATTTGATCGGTTACTGCTGCGACGGCGATGAGAGGCTNCTCGTTGCCGAGTACATGCCCAATGACACCCTCGCCAAACACCTCTTCCATTGGGAAAATCAGACCATTGAGTGGGCCATGCGCTTGAGAGTCGCTCTTTACATTGCACAGGCTCTGCATTATTGCACTTCCGAGGGTCGCCCCTTATACCATGACTTGAATGCTTATCGTGTTCTCTTCGACGAGGAGGGTGATCCCCGTCTCTCCTGTTTTGGTTTAATGAAGAACAGCAGGGATGGAAAAAGTTATAGCACAAACCTTGCTTATACACCTCCTGAATATTTGAGAAATGGAAGGGTCACNCCTGAAAGTGTCATTTACAGCTTTGGAACTGTTCTTCTAGATCTCCTCAGTGGCAAGCACATCCCTCCAAGTCATGCACTTGATATGATACAGGGGAAAAACAACATGCTCTTGATGGACTCTCATTTGGAGGGAAAGTTTTCTACAGAAGAGGCAACAGTAGTTGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCACGGGAGCGGCCTGATACAAAGGATTTGGTCACAACACTTGCTCCATTACATACAAAACCCGACGTTCGTTCTCACATCATGCTTGGAATTCCAAAACACGAGGAAGCTCCATCAACCCCCCAACGTCCTCTTTCAGCAATGGGCGAGGCTTGTTCAAGAATGGACCTCACTGCAATACATCAGATCTTGGTTGCAACGCACTACAGAGACGATGAAGGGACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGGGACTACGCATTCCGTGACAAGGATTTTAAGACAGCCATTGATAACTATTCCCAGTTCATTGACGTGGGAACGATGGTCTCACCGACTGTTTTTGCAAGGCGCAGTCTATGCTATCTGCTATGTGATCAACCAGATCCTGCTCTACGAGATGCGATGCAAGCACAATGTGTATATCCAGACTGGCCCACGGCTTTCTACATGCAATCAGTTGCTCTTGCAAAGCTGGACATGCACAAGGATGCGGCTGACATGTTAAATGAGGCAGCTGCATTGGAAGAGAAGAGGCAAAGAGGAGCGAGAGGATCATAGTTGTGTGCAGTGGGCTAATTTGAGGGTGCCTAGTTCTGTGTAAAGGTTGAGCTGGGAAGCAAAAAACTAACGTTTGAATCTGAATTAAAAATGTGTCAGAGAAAGACAACACTGGTGCTGGTGGAGTAGACCGCACGTGCACTTTGTTTCACCAACTTATAGGAATCGGGTCACAACTTGAAAACTGTGCTTATGCACTCTAAATTGTGAAGGAATGCCNGTAATTTTTCCATTGTTAATGAAATTGATTGTTTGATGCCTACAGGGTTGGTGTCAACCAGGTGTCGATTGAGGTTATTCTAACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00059	216168	223482	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.16.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14500	BSK	EC:2.7.11.1	Plant hormone signal transduction	map04075

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000059s00006304.1	PF07714.12	Pkinase_Tyr	105	344	3.50E-28
Glyur000059s00006304.1	PF13414.1	TPR_11	421	481	1.10E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	32.922
SRR1783600	control	32.975
SRR1783602	moderate drought stress	31.053
SRR1811619	moderate drought stress	30.899

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	46.081
DRR006520	Root Summer glycyrrhizin high producing strain	45.519
DRR006521	Root Winter glycyrrhizin high producing strain	52.891
DRR006522	Root Winter glycyrrhizin high producing strain	51.968
DRR006523	Root Summer glycyrrhizin low producing strain	52.324
DRR006524	Root Summer glycyrrhizin low producing strain	52.510
DRR006525	Leaf Summer glycyrrhizin high producing strain	20.677
DRR006526	Leaf Summer glycyrrhizin high producing strain	20.705

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	52.487
SRR2868004	Drought Stress (root)	56.201
SRR2967015	Control (root)	52.671

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	43.647
SRR9715740	Leaf	38.614
SRR9715741	Leaf	51.346
SRR9715739	Root	33.690
SRR9715742	Root	49.349
SRR9715743	Root	46.194

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	49.517
SRR8749028	MeJA induced 9h	40.633
SRR8749029	MeJA induced 9h	37.506
SRR8749030	Uninduced	21.723
SRR8749031	Uninduced	14.890
SRR8749032	Uninduced	16.991

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	50.266
SRR8400027	Control - Root	51.468