Gene detail

Gene detail information of Glyur000059s00006303

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35240.2	8.00E-142	Protein of unknown function (DUF630 and DUF632)
NR	XP_006575762.1	0	PREDICTED: uncharacterized protein LOC778196 [Glycine max]
trEMBL	tr\|I1JJV6\|I1JJV6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G48040.1}

Sequence

Transcript Sequence

>Glyur000059s00006303.1
TGGTGGTGTTTTTACTTTAATTAATTTAATTAAGACCGGTGACCGGTGACTGGTGACTGGTGAGAGAGAGAGAGGAATAGAAATAATAGGATAGAAGCGGACGAGGGAGTCCATGCTGGCAAAAGATTCCCTCCCCTCCCCTCCCTCATTCATTCGCTTCTTTTCATCCTCCTCTCCCCTCCCTCCCAGTAAGTAACTGTACTACTACCACTACCACTACCACTATCTTTTCCTTTCCTTTTCCTTGTGTTGTGTTGTGTTGTGTTGCTGTTGTGTTTAATAATAATAACAGTACAATTACAAACCCTAAAAAGATCCATCCATTAAGCCAGTCAAAAAAGCCTCACTCCATCCATCTCCTTATTCCTATCCCCTGACAGAGTGATTGGGTGGGTGGGTTTCTAATTGTAGTTTCAATCTATTCTTAATCTGATTGTGTAATTTTGGGGGAATTGGAATTGGAATTGGGATTGGGATTGTATGGGGTGTGCCAGCTCGAAGCTGGACGATCTGCCGGCGGTGGCGCTGTGCCGGGAGCGTTGTACCTTTCTGGACGAAGCAATTAACCAGCGCTATGCCCTCGCCGCTGCCCACGTTGCCTACATCAACTCCCTCAGAGCAATTGGCCACTCCCTACACCTCTTCGTTCAACAAGATAGGGATTTCGCCGCCTCACCGTTACCCTCGCCGTCACCGTCACCGTCACCGTCACCTCCTCATAAGACCAAGAACCACCACCTCGCAGCCAAACACGACTCTCCGTCTCCGCCTCACTCCGATTCCGGTTCTCACCTTCACTTCCACTCCGATTCCGACGACGACGACGACCTCGGTTCCCTTCACCATTCCCCCCAGTCCTCTCCTATGCACCTCAACAACCTCCCCGACATGAGTGGCTACTACGATGATTCACGATCACAACCGGATCACCAACACCACACCTCTTCCAACTTTCATATGAATTTCATGAAGAACAGGCCTGCCCCTTCGATTGTGTACGAGCAGAGGCCCATGAATCCGAACACTGTTTATGTGGGCGAGTCCTCTTCCTCTTCCTCCTTTTACCCCCCTTATCCTCCACAATCATCATACCCCTATAGCAACAGCAACAACAACAACTACAATAACTATTCATTCCCTCCGGCACCGTTTTATGGATCTTCTCCACCGCCTCCCCCCGCGGCGGCGTCTTCGTCCAAGCCGCCTCCCCCTCCGCCTTCCCCTCCGAGGGCTTCCACGTGGGATTTTCTCAACTTCTTCGACAGTGATGACAAGATGTACTATCCCCAGACTCACTACACGCCCACCGCCACCCCCAGCCGCGATTCGAGGGAGGTCAGGGAGGACGAGGGGATCCCCGAGTTGGAAGAAGAGGATTACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGGAAGTGGTGAAGCAGGTCCATGGGGATCACAAGCGGGTCGACCCTAACCACCATGAATCCCACGCCCACGCCCCTTCCTCTCCCGACGAGGGGCCCGAGGTCGAATACGAGGTGCACGTGGTGGATAAGAAAGTCGTCGACGATGATGACAGCAAGCCCAAGCCCAAGCCCAACGACCACGCCGCATTCCGGCCCGGCTCCCGGAATCCCCTCGAGGTTGCCAAAGAGATTGAGATTCTCTTTCAGAAGGCTTCGGAATCCGGTGCCCATATCGCCAAGATCCTCGAGGTCGGAAAGCTTCCCTATCACCCAAAGCACGGGGCTTATCAAGCTTCTTCCAAGATGCTACATCTGGTTGCTCCCTCACTGTCCGTGGTGTCTTCGCAGCCTTCTACTTCTAAAACTGCCCAATCCGCATCCTCCACCCTTGATCCTAACACGGATCTTGATGTTGATCTAACAACCAGGTCGCGCAATCTCTCGTCTACGCTGCAGAAGNTGTATCTTTGGGAGAAGAAACTCTATCATGAGGTTAAGGCAGAGGAAAAGATGCGGGTCATGCACGATAGGAAGTGTCGCAAGCTCAAGCGTTTGGATGAAAGGGGTGCTGATTTCCATAAAGTGGATACCACTCGAGCTTCGATTAGGGATCTGTCCACAAAAATAAGAATGGCAATTCAGGTTGTTGATAAGATTTCTATGACGATAAATAAGATCAGGGATGAAGAACTGTGGCCGCAGCTGAGGGAATTAATCCAGGGGTTTACCAGAATGTGGAAATCCATGCTTGAATGCCATCATAGTCAGTGCGAAGCAATTAGAGAAGCCAGAATTCTGGGTTCTGGTGGATCCAGAAAGAAGAGTGGTGATGGCCATCTTCGAGCTACAAAGCAGTTCGAACAAGAGCTTATCAATTGGACTTTCCAATTCTCTGGCTGGATNAGTGCCCAGAAAGGTTATGTAAGAGCATTGAATAATTGGCTGCTGAAATGTCTCCTGTATGAACCCGAAGAAACACCTGATGGCATAGTCCCCTTTTCCCCTGGTAGAATTGGTGCTCCCCAAATATTTGTAATATGTAATCAGTGGTCCCAAGCTTTGGATAGAATATCTGAAAAGGAAGTTGTTGATACCATGCATGTATTTACCATGAGTGTGCTGAAGATATGGGAACAAGATAAGCTAGAATTGCATCAGCAGGTGATACACAACAAGGATCTTGAGAGAAAAGTGAGAAATNTAGACAGAGATGACCAGAAGCTGCACAAGCAAATTCAGGCATTAGAGCGGAAAATGGTTCTGGCATCTGGGGAAGGGAATATCATATATCCGAGTGACAAAAGCAGTAGTCTACAAGCTAGCTTGCAGCGTATTTTTGAGGCAATGGAGAGGTTTACTGATGAATCTGTGAGAGCTTATGAGGAGTTGCTACAACGGAGTGAAGAAGAAAGTGCAGCTCAAAATCATGGAGGAGTTCCGTAGGGTGGTGTAGTTAGATGGAAATTAAAACCATGTCCTGGCCATTTTCCAAGAACAGAATCTTGTTGATCTCCTGCCACTAGCTCTTCTTTACAACAGAGTTTTGGGATGAGGGGGTTGGGTTTGACTTCTCTGTTGCATCCTGGGAGCGGTCGATGCNTGTTTTGAAAGAAGAGTCGAGCGAACATCTTCCCCTACATACTAAGCTGCATTTTGCTTTAGATGCGGGATGGAACAGTGGTCAGAAGAGATGTTTTGTGGCTCGTAAGTTGGAGGCGTGAGGCGTACAATTGCTCNTTTTGGGTACTCACCTCTATAAGATTAAGGCTGGCAACAAGGGAAAGGAAGGTAGTCCTCACTAACCATACAGGTAGGATTGTTTGAACTGCGAGAAGACCTTAGAGGATCCTTCCTTGCACATTTTAACATCTGACCTCGTATGTTCAGATGAAGGACGAACTTTCAGGTACCTAAGTCTATCCCTGCGCAACTCAGGTGATGATAGAATAGAAGGGTGCTTCTCAAACTGAAGCAGTATAATGAGCATACAAATGAAAAAAAAAAATAAAAAAATTCTTACGAGCAATTGGAAGAAGTCTCACTCNCATGATGAACATAGTAGCTGTCTGTCGGAGTGACGCAAGTCACTGAATGTATGGGTAGTATTATTATTAGTTCCTGTATAAAATTATGTTCCTTTCATAAAAATATTCGTTTTTAAGTTAAATTATTGTATAGATTGCCTATTTTTTTGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00059	209058	214213	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000059s00006303.1	PF04783.7	DUF630	1	59	2.00E-23
Glyur000059s00006303.1	PF04782.7	DUF632	381	698	1.70E-109

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.666
SRR1783600	control	15.976
SRR1783602	moderate drought stress	28.316
SRR1811619	moderate drought stress	28.129

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	23.536
DRR006520	Root Summer glycyrrhizin high producing strain	23.721
DRR006521	Root Winter glycyrrhizin high producing strain	9.738
DRR006522	Root Winter glycyrrhizin high producing strain	9.544
DRR006523	Root Summer glycyrrhizin low producing strain	20.848
DRR006524	Root Summer glycyrrhizin low producing strain	21.064
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.579
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.411

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.162
SRR2868004	Drought Stress (root)	32.492
SRR2967015	Control (root)	39.673

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.109
SRR9715740	Leaf	14.608
SRR9715741	Leaf	13.149
SRR9715739	Root	4.846
SRR9715742	Root	17.625
SRR9715743	Root	12.888

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	21.759
SRR8749028	MeJA induced 9h	27.527
SRR8749029	MeJA induced 9h	12.957
SRR8749030	Uninduced	33.590
SRR8749031	Uninduced	52.435
SRR8749032	Uninduced	22.552

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	24.202
SRR8400027	Control - Root	24.350