Gene detail information of Glyur000059s00006300 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16630.1 | 6.00E-06 | DEA(D/H)-box RNA helicase family protein |
| Swissprot | tr|Q9ZRZ8|RH28_ARATH | 7.00E-07 | DEAD-box ATP-dependent RNA helicase 28 |
| trEMBL | tr|V7BK95|V7BK95_PHAVU | 1.00E-05 | Uncharacterized protein {ECO:0000313|EMBL:ESW18414.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00059 | 191477 | 192354 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.301 |
| SRR1783600 | control | 0.095 |
| SRR1783602 | moderate drought stress | 7.780 |
| SRR1811619 | moderate drought stress | 6.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.198 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.860 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.723 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.024 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.236 |
| SRR9715740 | Leaf | 0.384 |
| SRR9715741 | Leaf | 0.245 |
| SRR9715739 | Root | 0.034 |
| SRR9715742 | Root | 0.141 |
| SRR9715743 | Root | 0.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.656 |
| SRR8400027 | Control - Root | 1.062 |