Gene detail

Gene detail information of Glyur000059s00006297

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G38370.1	2.00E-86	Phosphoglycerate mutase family protein
NR	KHN46872.1	1.19E-140	hypothetical protein glysoja_031172 [Glycine soja]
COG	YP_003898073.1	2.00E-16	hypothetical protein HELO_3004 [Halomonas elongata DSM 2581]
trEMBL	tr\|I1M642\|I1M642_SOYBN	4.00E-141	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G00490.1}

Sequence

Transcript Sequence

>Glyur000059s00006297.1
GAAGATTTTAAATATGTACATCGAAGATGGATCTATNGGATTTAGTGCACTATACCTAATTAACATAATATATTTAATAGTAACGTTTAAGTGAATTTTATATTCAATAATATAACCTTTAATCCTATTGCTCAAACTGTATACATAGATAGATAGATTGATAGAACAGAGAAGAGTAGGGGAGAAGAGACTAGAGAGGCAGGAAGAGATAATTTTTGAAGGGAATCAATGTCCGACTCCGTGGGAATAAAGAACAGATACTGGGTTCTGAGGCATGGCAAGAGCATTCCCAACGAGCGAGGCCTCATTGTTTCCTCCATGGAAAACGGCACGCGCCCTGAATTCCAATTGGCCTCCGACGGTGTCAATCAAGCCCAACACGCTGCAAATTTATTCCAAAAGGAACTAGAGGCTAATAATATACCACTTGCCAATGTACGCATTTGCTACTCCCCATTTTCAAGAACAAGCCACACGGCCAGAGTTGTTGCAACTGTGTTGAACCTTCCCTTTGAAGGGCCCCAGTGTAAGGTGATCGAAGATCTTCGAGAACGCTTCTTTGGTCCTTCCTTTGAACTTTTGTCGCATGATAAATATGAAGAGATCTGGGAAATAGATGAGAAAGATCCACTTGTTGGGCCAGAAGGAGGGGAAAGTGTCAAGGATGTTGCCTGTAGACTTGCAAGAGCAATGGCCATTATGGAATCAGAATTTGAAGGATGTGCAATTTTGGTTGTCAGCCATGGGGATCCCCTGCAAATCTTGCAAACAATTCTGCATGGAGCTAATCAACACAAGGAACCCACCTGCGATGACTTGGATTCAATACTAAAGGCAGTTCAGGTGGCACCGATCTTGTCCCTGCACCGCAAATATGCACTGCTTACCGGAGAGCTCAGGGGAGTCATTTGAGATTTGACTTCGAGGTCTAGCATAAAGGCTATTGTTTTGGTTGGGTTGGGTTTGCATCCCCTATTCCATTATTTAGTTCATTNTCATATCCAAAACTTTCTGGAGTATTGAGCAAATAATTTGCTTGTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00059	180092	182379	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000059s00006297.1	PF00300.17	His_Phos_1	11	178	2.20E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.507
SRR1783600	control	4.502
SRR1783602	moderate drought stress	4.665
SRR1811619	moderate drought stress	4.581

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.789
DRR006520	Root Summer glycyrrhizin high producing strain	6.605
DRR006521	Root Winter glycyrrhizin high producing strain	9.413
DRR006522	Root Winter glycyrrhizin high producing strain	10.247
DRR006523	Root Summer glycyrrhizin low producing strain	8.899
DRR006524	Root Summer glycyrrhizin low producing strain	9.233
DRR006525	Leaf Summer glycyrrhizin high producing strain	18.949
DRR006526	Leaf Summer glycyrrhizin high producing strain	18.367

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.216
SRR2868004	Drought Stress (root)	18.891
SRR2967015	Control (root)	17.894

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.279
SRR9715740	Leaf	10.372
SRR9715741	Leaf	6.498
SRR9715739	Root	2.107
SRR9715742	Root	2.069
SRR9715743	Root	2.224

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	38.448
SRR8749028	MeJA induced 9h	26.686
SRR8749029	MeJA induced 9h	38.783
SRR8749030	Uninduced	14.055
SRR8749031	Uninduced	29.603
SRR8749032	Uninduced	38.634

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.812
SRR8400027	Control - Root	12.301