Gene detail

Gene detail information of Glyur000059s00006290.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G17220.2	9.00E-140	Protein kinase superfamily protein
NR	NP_001235086.1	0	protein kinase [Glycine max]
COG	YP_001958461.1	3.00E-23	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|P27450\|CX32_ARATH	4.00E-143	Probable serine/threonine-protein kinase Cx32, chloroplastic (Precursor)
trEMBL	tr\|C6ZRU2\|C6ZRU2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G00380.1}

Sequence

Transcript Sequence

>Glyur000059s00006290.2
ATGGGAAATTGCTGGGGTTCTCCACCTAACAGCCCAACCCCTACCGGAACCGGTAACCTAGCTCAATCATTTCAGGGCAAAGTGCTTGGTGGATTCCAATGGGAAATTGCTGGGGTTCTCCACCTAACAGCCCAACCCCTACCGGAACCGGTTTCAGTTTCAGGGCAAAGTGCTTGGTGGATTCCAATGGGAAATTGCTGGGGTTCTCCACCTAACAGCCCAACCCCTACCGGAACCGCTACACCGGGGACATCCCAGACGATCAGCAGCAGCTATACTAGTACTACTAGTACTACTACTACTACTACTTCTTCTTCTGGAAGTGGGAGCAGCTCCATAAATAGCAAGTTCTCGGTGTCGAGTGGTGGCGAACCTTCTCCAGATGGCCAGATCCTACCCACCTCTAGTCTTAGGATCTTCACTTTTGCCGAGTTGAAGGCTGCAACCAGGAACTTCAGACCCGACACGCTGCTTGGGGAGGGAGGTTTTGGAAAAGTCTACAAGGGTTGGCTTGAAGAGAAGACATCGTCAAAGAGTGGAAGTAGTGGAACTGTTATCGCCGTCAAAAAATTGAACTCCGAAAGCTTACAAGGAATCGAGGAGTGGCAGTCAGAAGTACATTTTCTAGGACGCCTCTCTCATCCTAACCTTGTTAAGCTGTTGGGATACTGTATTGAGGAAACAGAGCTTCTTCTCGTCTATGAATACATGCAGAAGGGCAGTTTGGAAAACCATCTATTTGGAAGGGGCTCTGCTGTTCAACCGCTTGCTTGGGACATCAGGCTTAAGATAGCAATTGGAGCAGCTCGTGGCCTTGCATTCTTGCATATATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATATTGCTTGATGGGTCCTATAATGCAAAGATATCAGACTTTGGCTTGGCAAAGCTGGGTCCTTCAGCTAGTCAATCCCATGTGACAACAAGGGTGATGGGCACATATGGTTATGCGGCTCCTGAATATGTAGCCACAGGGCATCTATATGTAAAGAGTGACGTATATGCATTTGGAGTTGTTTTGGTTGAAATACTAACAGCACTGCGAGCACTTGATNCCAACCGTCCAAGTGGGCAACACAATCTAACGGAATGGATCAAACCATACCTACAGGACAGAAGAAAACTGAANAGCATCATGGATTCTCAATTGGGAGGAAAATATCCACNCAAAGCTGCANTTCACATAGCTAAGCTTGCTTCAAGATGTCTTGCAGCTGAGCCCAAACAGCGGCCACCAATGAAGGAAGTTTTGGAGNACTTGGAGAGAATTCAAGCTGCCAATGCGGAGCCNAAATTCCGCTCAACTCATTCCCGTGCTACCCACCAGGCTGTGCATCATCGTTCTCCACTCCATTGAATGGATGAGAGAGGCTGTTGGTTGTGTAATTTGTCTCTCCATTCCATTGAAGAGTTTGCTAGTTGCTCATTTTGTACTTCTTGGACTCAACAAACATATATTATATATTTTGTTAGTGCTGTAAAGTGTAAATGCTATCATTTCTGTGGCTTCACTGAGTTGTGGTTAATTAGTTTTGCTAAACAGGTGGAGAGGAGGAGGGACTCGTTACTTTATCTACAGCCCAATTCCCTCCCAAATATGCATTTTGGATCTAAANAAAAACTGATAAGATATGACAATGCCTTGAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00059	110647	113969	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.2.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000059s00006290.2	PF07714.12	Pkinase_Tyr	157	432	5.00E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	75.943
SRR1783600	control	76.070
SRR1783602	moderate drought stress	176.735
SRR1811619	moderate drought stress	181.968

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	105.134
DRR006520	Root Summer glycyrrhizin high producing strain	105.089
DRR006521	Root Winter glycyrrhizin high producing strain	80.605
DRR006522	Root Winter glycyrrhizin high producing strain	78.118
DRR006523	Root Summer glycyrrhizin low producing strain	154.072
DRR006524	Root Summer glycyrrhizin low producing strain	154.875
DRR006525	Leaf Summer glycyrrhizin high producing strain	22.191
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.046

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	54.034
SRR2868004	Drought Stress (root)	84.732
SRR2967015	Control (root)	81.828

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	105.614
SRR9715740	Leaf	105.533
SRR9715741	Leaf	144.171
SRR9715739	Root	55.369
SRR9715742	Root	117.181
SRR9715743	Root	98.972

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	132.511
SRR8749028	MeJA induced 9h	133.651
SRR8749029	MeJA induced 9h	153.122
SRR8749030	Uninduced	342.925
SRR8749031	Uninduced	183.237
SRR8749032	Uninduced	207.764

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	79.412
SRR8400027	Control - Root	97.128