Gene detail information of Glyur000059s00006273 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38200.1 | 2.00E-113 | SEC7-like guanine nucleotide exchange family protein |
| NR | XP_006595629.1 | 0 | PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X2 [Glycine max] |
| Swissprot | tr|F4JSZ5|BIG1_ARATH | 6.00E-125 | Brefeldin A-inhibited guanine nucleotide-exchange protein 1 |
| trEMBL | tr|K7KBU2|K7KBU2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G48200.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00059 | 18101 | 28831 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.578 |
| SRR1783600 | control | 2.723 |
| SRR1783602 | moderate drought stress | 2.347 |
| SRR1811619 | moderate drought stress | 2.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.782 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.493 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.573 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.418 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.497 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.099 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.896 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.045 |
| SRR2868004 | Drought Stress (root) | 1.244 |
| SRR2967015 | Control (root) | 1.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.255 |
| SRR9715740 | Leaf | 0.176 |
| SRR9715741 | Leaf | 0.371 |
| SRR9715739 | Root | 0.041 |
| SRR9715742 | Root | 0.151 |
| SRR9715743 | Root | 0.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.159 |
| SRR8749028 | MeJA induced 9h | 0.167 |
| SRR8749029 | MeJA induced 9h | 0.085 |
| SRR8749030 | Uninduced | 0.341 |
| SRR8749031 | Uninduced | 0.342 |
| SRR8749032 | Uninduced | 0.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.301 |
| SRR8400027 | Control - Root | 0.319 |