Gene detail information of Glyur000058s00006182 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25360.2 | 3.00E-22 | |
| NR | KHN15085.1 | 2.11E-60 | hypothetical protein glysoja_011703 [Glycine soja] |
| trEMBL | tr|I1LZX5|I1LZX5_SOYBN | 6.00E-61 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G23520.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 337521 | 341140 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.538 |
| SRR1783600 | control | 11.772 |
| SRR1783602 | moderate drought stress | 10.459 |
| SRR1811619 | moderate drought stress | 10.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.530 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.434 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.876 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.815 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.128 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.279 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.585 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.380 |
| SRR2868004 | Drought Stress (root) | 30.394 |
| SRR2967015 | Control (root) | 26.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.782 |
| SRR9715740 | Leaf | 23.578 |
| SRR9715741 | Leaf | 24.205 |
| SRR9715739 | Root | 9.136 |
| SRR9715742 | Root | 12.924 |
| SRR9715743 | Root | 13.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.609 |
| SRR8749028 | MeJA induced 9h | 7.585 |
| SRR8749029 | MeJA induced 9h | 5.879 |
| SRR8749030 | Uninduced | 2.330 |
| SRR8749031 | Uninduced | 0.852 |
| SRR8749032 | Uninduced | 1.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.894 |
| SRR8400027 | Control - Root | 28.852 |