Gene detail information of Glyur000058s00006168 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47650.1 | 2.00E-06 | DnaJ/Hsp40 cysteine-rich domain superfamily protein |
| NR | XP_004508503.1 | 6.68E-35 | PREDICTED: uncharacterized protein LOC101512121 [Cicer arietinum] |
| trEMBL | tr|I3T896|I3T896_LOTJA | 3.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:AFK48738.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 253041 | 256524 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.013 |
| SRR1783600 | control | 7.280 |
| SRR1783602 | moderate drought stress | 7.526 |
| SRR1811619 | moderate drought stress | 7.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.320 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.277 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.276 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.715 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.024 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.264 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 199.643 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 200.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.509 |
| SRR2868004 | Drought Stress (root) | 23.240 |
| SRR2967015 | Control (root) | 21.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 182.808 |
| SRR9715740 | Leaf | 300.483 |
| SRR9715741 | Leaf | 139.336 |
| SRR9715739 | Root | 20.292 |
| SRR9715742 | Root | 17.403 |
| SRR9715743 | Root | 16.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.566 |
| SRR8749028 | MeJA induced 9h | 50.744 |
| SRR8749029 | MeJA induced 9h | 92.496 |
| SRR8749030 | Uninduced | 27.938 |
| SRR8749031 | Uninduced | 36.460 |
| SRR8749032 | Uninduced | 63.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.720 |
| SRR8400027 | Control - Root | 34.780 |