Gene detail information of Glyur000058s00006167 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004508505.1 | 2.52E-120 | PREDICTED: uncharacterized protein LOC101512769 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7M082|K7M082_SOYBN | 4.00E-124 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G23640.6} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 249340 | 253389 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000058s00006167.1 | PF11317.3 | DUF3119 | 77 | 208 | 1.20E-35 |
| Glyur000058s00006167.2 | PF11317.3 | DUF3119 | 103 | 195 | 1.20E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.316 |
| SRR1783600 | control | 14.198 |
| SRR1783602 | moderate drought stress | 10.481 |
| SRR1811619 | moderate drought stress | 10.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.119 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.267 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.339 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.299 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.470 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.970 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 73.759 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 73.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.784 |
| SRR2868004 | Drought Stress (root) | 11.773 |
| SRR2967015 | Control (root) | 9.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 57.932 |
| SRR9715740 | Leaf | 89.704 |
| SRR9715741 | Leaf | 59.096 |
| SRR9715739 | Root | 9.254 |
| SRR9715742 | Root | 12.530 |
| SRR9715743 | Root | 11.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.540 |
| SRR8749028 | MeJA induced 9h | 6.899 |
| SRR8749029 | MeJA induced 9h | 14.240 |
| SRR8749030 | Uninduced | 12.281 |
| SRR8749031 | Uninduced | 12.445 |
| SRR8749032 | Uninduced | 25.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.619 |
| SRR8400027 | Control - Root | 18.470 |