Gene detail information of Glyur000058s00006156 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19020.1 | 5.00E-06 | |
| NR | AFK40139.1 | 1.87E-34 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SIP7|I3SIP7_LOTJA | 7.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:AFK40139.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 197872 | 198087 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 56.586 |
| SRR1783600 | control | 53.708 |
| SRR1783602 | moderate drought stress | 66.767 |
| SRR1811619 | moderate drought stress | 66.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 213.186 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 216.182 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.444 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.017 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 663.921 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 662.335 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 92.025 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 96.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 183.297 |
| SRR2868004 | Drought Stress (root) | 763.940 |
| SRR2967015 | Control (root) | 561.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1387.039 |
| SRR9715740 | Leaf | 499.092 |
| SRR9715741 | Leaf | 1325.645 |
| SRR9715739 | Root | 260.388 |
| SRR9715742 | Root | 346.140 |
| SRR9715743 | Root | 303.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2726.127 |
| SRR8749028 | MeJA induced 9h | 4687.203 |
| SRR8749029 | MeJA induced 9h | 6636.706 |
| SRR8749030 | Uninduced | 10757.768 |
| SRR8749031 | Uninduced | 13992.911 |
| SRR8749032 | Uninduced | 9382.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 252.877 |
| SRR8400027 | Control - Root | 294.950 |