Gene detail information of Glyur000058s00006149 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G48140.1 | 7.00E-34 | B12D protein |
| NR | XP_003527039.1 | 6.09E-53 | PREDICTED: uncharacterized protein LOC100499787 [Glycine max] |
| trEMBL | tr|C6T215|C6T215_SOYBN | 2.00E-52 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU15648.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 164327 | 166990 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000058s00006149.1 | PF06522.6 | B12D | 5 | 85 | 5.30E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 655.299 |
| SRR1783600 | control | 656.330 |
| SRR1783602 | moderate drought stress | 1017.731 |
| SRR1811619 | moderate drought stress | 1011.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1400.767 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1386.217 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1738.285 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1691.393 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1777.359 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1772.754 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 83.221 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 83.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 766.203 |
| SRR2868004 | Drought Stress (root) | 985.154 |
| SRR2967015 | Control (root) | 1114.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 356.996 |
| SRR9715740 | Leaf | 366.770 |
| SRR9715741 | Leaf | 563.082 |
| SRR9715739 | Root | 1953.351 |
| SRR9715742 | Root | 1411.230 |
| SRR9715743 | Root | 1493.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 427.400 |
| SRR8749028 | MeJA induced 9h | 721.561 |
| SRR8749029 | MeJA induced 9h | 448.891 |
| SRR8749030 | Uninduced | 574.907 |
| SRR8749031 | Uninduced | 325.096 |
| SRR8749032 | Uninduced | 649.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1265.703 |
| SRR8400027 | Control - Root | 1326.308 |