Gene detail information of Glyur000058s00006142 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G48090.1 | 7.00E-95 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004501967.1 | 0 | PREDICTED: uncharacterized protein LOC101509849 [Cicer arietinum] |
| Swissprot | tr|Q9XF23|EDS1L_ARATH | 3.00E-124 | Protein EDS1L {ECO:0000305} |
| trEMBL | tr|I1KCL6|I1KCL6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G19890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 133219 | 136799 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000058s00006142.1 | PF01764.20 | Lipase_3 | 82 | 159 | 2.80E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.633 |
| SRR1783600 | control | 43.686 |
| SRR1783602 | moderate drought stress | 43.051 |
| SRR1811619 | moderate drought stress | 43.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.327 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.421 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.814 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.019 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 42.840 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.826 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 149.288 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 149.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 71.106 |
| SRR2868004 | Drought Stress (root) | 70.568 |
| SRR2967015 | Control (root) | 79.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 125.034 |
| SRR9715740 | Leaf | 62.794 |
| SRR9715741 | Leaf | 127.878 |
| SRR9715739 | Root | 25.599 |
| SRR9715742 | Root | 87.758 |
| SRR9715743 | Root | 78.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.090 |
| SRR8749028 | MeJA induced 9h | 39.630 |
| SRR8749029 | MeJA induced 9h | 18.424 |
| SRR8749030 | Uninduced | 25.177 |
| SRR8749031 | Uninduced | 12.094 |
| SRR8749032 | Uninduced | 10.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 60.950 |
| SRR8400027 | Control - Root | 47.538 |