Gene detail information of Glyur000058s00006140 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01680.1 | 9.00E-46 | |
| NR | NP_001239844.1 | 0 | uncharacterized protein LOC100797481 [Glycine max] |
| trEMBL | tr|E2FKI3|E2FKI3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G03611.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 125170 | 130037 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000058s00006140.1 | PF14576.1 | SEO_N | 24 | 67 | 5.50E-07 |
| Glyur000058s00006140.1 | PF14576.1 | SEO_N | 70 | 257 | 1.50E-63 |
| Glyur000058s00006140.1 | PF14577.1 | SEO_C | 429 | 652 | 5.90E-67 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.752 |
| SRR1783600 | control | 1.741 |
| SRR1783602 | moderate drought stress | 1.774 |
| SRR1811619 | moderate drought stress | 1.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.480 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.311 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.594 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.424 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.553 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.922 |
| SRR2868004 | Drought Stress (root) | 5.126 |
| SRR2967015 | Control (root) | 8.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.291 |
| SRR9715740 | Leaf | 0.050 |
| SRR9715741 | Leaf | 0.053 |
| SRR9715739 | Root | 0.297 |
| SRR9715742 | Root | 1.080 |
| SRR9715743 | Root | 0.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.031 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.007 |
| SRR8749031 | Uninduced | 0.001 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.603 |
| SRR8400027 | Control - Root | 2.723 |