Gene detail information of Glyur000058s00006137 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01680.1 | 8.00E-44 | |
| NR | NP_001242554.1 | 0 | uncharacterized LOC100807591 [Glycine max] |
| Swissprot | tr|Q7XPE8|NRX3_ORYSJ | 4.00E-07 | Probable nucleoredoxin 3 |
| trEMBL | tr|E2FKI4|E2FKI4_SOYBN | 0 | Sieve element occlusion l {ECO:0000313|EMBL:ADN32796.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 101201 | 105453 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000058s00006137.1 | PF14576.1 | SEO_N | 25 | 291 | 5.80E-87 |
| Glyur000058s00006137.1 | PF14577.1 | SEO_C | 463 | 682 | 2.90E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.215 |
| SRR1783600 | control | 1.189 |
| SRR1783602 | moderate drought stress | 1.163 |
| SRR1811619 | moderate drought stress | 1.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.693 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.572 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.629 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.485 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.291 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.495 |
| SRR2868004 | Drought Stress (root) | 7.294 |
| SRR2967015 | Control (root) | 10.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.393 |
| SRR9715740 | Leaf | 0.030 |
| SRR9715741 | Leaf | 0.079 |
| SRR9715739 | Root | 0.107 |
| SRR9715742 | Root | 0.588 |
| SRR9715743 | Root | 0.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.036 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.055 |
| SRR8749032 | Uninduced | 0.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.968 |
| SRR8400027 | Control - Root | 2.719 |