Gene detail

Gene detail information of Glyur000058s00006131.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G20770.1	7.00E-178	Ethylene insensitive 3 family protein
NR	KHN33829.1	0	Protein ETHYLENE INSENSITIVE 3 [Glycine soja]
Swissprot	tr\|O24606\|EIN3_ARATH	0	Protein ETHYLENE INSENSITIVE 3
trEMBL	tr\|V7BJC6\|V7BJC6_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW18077.1}

Sequence

Transcript Sequence

>Glyur000058s00006131.1
ATGATGATGATGTTTGAGGAGATGGGTCTTTCTGGAGAGGGGGATATTACCGCCCGGCAAACTGAACCTGAGGCGATTGTCGAGGATGATTATAGTGATGAAGAGATTGATGTAGATGAGCTTGAGAGGAGGATGTGGAGGGATAAAATGCGTTACAAGCGACTCAAGGAACAAAGTAAACCTAAGGAAGGGATTGATGCAGCTAAGCAGAGGCAATCCCAAGAACAGGCAAGGAGGAAAAAGATGTCAAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCTCAAGGATTTGTTTACGGGATAATTCCTGAGAAGGGAAAACCGGTGACTGGGGCATCTGATAATCTCCGCGAATGGTGGAAGGATAAGGTTAGGTTTGATCGTAATGGTCCTGCTGCCATAGCCAAGTACCAAGCGGATAATGCGATTCCAGGGAAGAATGATGGATGCAATTCCATTGGTCCAACCCCTCACACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTATCAGCACTCATGCAGCACTGTGATCCCCCACAGAGGCGGTTTCCATTGGAGAAGGGTGTTCCTCCGCCATGGTGGCCCACGGGGAATGAAGAGTGGTGGCCTCAAATTGGTTTACCAAAAGATCAAGGTCCTCCACCTTACAAGAAGCCTCACGACCTGAAGAAGGCATGGAAGGTTGGAGTTCTAACTGCAGTTATCAAGCACATGTCTCCTGATATTGCCAAGATTCGCAAGCTTGAGGCCTTAGCACGAGAGCTTTACCCTGATTATTGCCCTCCATTAGCCTCAGCTGGAGGAAGGGGAGACGATGAGCCAAATTTTGATGTGCTGGACAGGAAACCGGAGAGTCTTCATACACCCAATCTTGGGATGGAGAGAATGAGGGTAAGACTGCCGGTACAGCAGCCTTCTTTCCCAGTTAAGGGAGAGGCTGTAACAAACATGGATTTCATGCGGAAGAGGAAGATCTCTGGCGATTTCAACATGATGATGGAGCAGAAAATTTACACGTGCGAACACTCTCAGTGTCCTTACAGTGAAGTTCGCCTTGGTTTTCAAGACAGGACTTCTAGGGACAATCATCAATTGAATTGTCCATATAGAGTCGCATCAGATTATGGTGGTCCAAATTTCCATGTTAATGAGGTAAAGCCAGTCATATTCCCCCAGTCCTTTGTTCAACCCAAAGCTACTGCTCAGTCTGTTAATTTGGTTTCACCTTCAATTGATCTAACTGGACTCGGGGTTCCAGAAGATGGTCAGAAAATGATTACTGACCTTATGTCAATCTATGATACAAATGTTCAAGGCAACAAGAATTTAAGTTCCAGTAATCGTGTAGCTGCAGAAAATCCCAACCTACTACCTCAGCCCAGCATTCAGCATCAGCATCAGCAGCAACAGGACAATTTCTTTCGCAGTCAGGGAATCGTCATGGAAGGAAACTTCTATGAGGAAGCCAACATGTCCTCCAATAATCATCCCATGTTTGCAAGAGAGGAAGGTCAATTTGACCGGTTCAAAGCTCTGAATTCTCCTTTTGAGAACAATCACAGTCACAGCAACAATAATTTCCATTTGATGTTTGGGTCCCCATGTGATTTGGCATCCTTTGATTTTAAGGAGGATATGCAAGGAGTAGGGATGGATGCTATTCAGAAACAGCCAGATATTTCAATATGGTACCAGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00058	63407	65290	-

Gene family

Gene family	subfamily
Transcription Factors Family	EIL

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0005634 nucleus

molecular_function
GO:0003700 transcription factor activity, sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000058s00006131.1	PF04873.8	EIN3	39	261	5.20E-123
Glyur000058s00006131.1	PF04873.8	EIN3	323	375	7.40E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	68.113
SRR1783600	control	68.075
SRR1783602	moderate drought stress	83.534
SRR1811619	moderate drought stress	83.699

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	94.155
DRR006520	Root Summer glycyrrhizin high producing strain	93.848
DRR006521	Root Winter glycyrrhizin high producing strain	32.411
DRR006522	Root Winter glycyrrhizin high producing strain	31.888
DRR006523	Root Summer glycyrrhizin low producing strain	165.814
DRR006524	Root Summer glycyrrhizin low producing strain	165.443
DRR006525	Leaf Summer glycyrrhizin high producing strain	68.977
DRR006526	Leaf Summer glycyrrhizin high producing strain	67.487

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	73.823
SRR2868004	Drought Stress (root)	103.968
SRR2967015	Control (root)	144.062

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	122.058
SRR9715740	Leaf	136.136
SRR9715741	Leaf	204.003
SRR9715739	Root	100.589
SRR9715742	Root	125.778
SRR9715743	Root	123.101

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	50.273
SRR8749028	MeJA induced 9h	87.001
SRR8749029	MeJA induced 9h	46.458
SRR8749030	Uninduced	52.173
SRR8749031	Uninduced	27.384
SRR8749032	Uninduced	21.868

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	63.106
SRR8400027	Control - Root	55.787