Gene detail information of Glyur000058s00006127 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27090.1 | 0 | Protein of unknown function (DUF630 and DUF632) |
| NR | XP_004501975.1 | 0 | PREDICTED: uncharacterized protein LOC101512544 [Cicer arietinum] |
| trEMBL | tr|A0A072V072|A0A072V072_MEDTR | 0 | BZIP transcription factor {ECO:0000313|EMBL:KEH35111.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 28446 | 34887 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000058s00006127.1 | PF04783.7 | DUF630 | 1 | 59 | 4.20E-24 |
| Glyur000058s00006127.1 | PF04782.7 | DUF632 | 332 | 676 | 1.80E-101 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.541 |
| SRR1783600 | control | 4.696 |
| SRR1783602 | moderate drought stress | 6.290 |
| SRR1811619 | moderate drought stress | 6.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.009 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.653 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.020 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.776 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.592 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.705 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.338 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.019 |
| SRR2868004 | Drought Stress (root) | 17.619 |
| SRR2967015 | Control (root) | 19.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.758 |
| SRR9715740 | Leaf | 2.589 |
| SRR9715741 | Leaf | 3.268 |
| SRR9715739 | Root | 0.983 |
| SRR9715742 | Root | 7.477 |
| SRR9715743 | Root | 5.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.613 |
| SRR8749028 | MeJA induced 9h | 45.913 |
| SRR8749029 | MeJA induced 9h | 21.062 |
| SRR8749030 | Uninduced | 20.405 |
| SRR8749031 | Uninduced | 20.329 |
| SRR8749032 | Uninduced | 16.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.785 |
| SRR8400027 | Control - Root | 8.169 |