Gene detail information of Glyur000058s00006124 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G21070.1 | 8.00E-99 | |
| NR | NP_001240915.1 | 1.65E-141 | uncharacterized protein LOC100789121 [Glycine max] |
| COG | YP_003549076.1 | 3.00E-15 | hypothetical protein [Coraliomargarita akajimensis DSM 45221] |
| trEMBL | tr|C6TMZ2|C6TMZ2_SOYBN | 6.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G44180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 12915 | 15611 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.129 |
| SRR1783600 | control | 3.037 |
| SRR1783602 | moderate drought stress | 1.056 |
| SRR1811619 | moderate drought stress | 1.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.875 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.731 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.505 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.467 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.060 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.532 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.510 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.921 |
| SRR2868004 | Drought Stress (root) | 9.878 |
| SRR2967015 | Control (root) | 11.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.669 |
| SRR9715740 | Leaf | 1.184 |
| SRR9715741 | Leaf | 1.205 |
| SRR9715739 | Root | 1.727 |
| SRR9715742 | Root | 1.829 |
| SRR9715743 | Root | 2.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.098 |
| SRR8749028 | MeJA induced 9h | 3.339 |
| SRR8749029 | MeJA induced 9h | 1.734 |
| SRR8749030 | Uninduced | 1.098 |
| SRR8749031 | Uninduced | 1.584 |
| SRR8749032 | Uninduced | 0.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.421 |
| SRR8400027 | Control - Root | 9.322 |