Gene detail information of Glyur000057s00009017 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38760.1 | 6.00E-103 | annexin 3 |
| NR | XP_003546730.1 | 0 | PREDICTED: annexin D3 isoform X1 [Glycine max] |
| Swissprot | tr|Q9SE45|ANXD3_ARATH | 2.00E-132 | Annexin D3 |
| trEMBL | tr|C6TK93|C6TK93_SOYBN | 0 | Annexin {ECO:0000256|RuleBase:RU003540} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00057 | 384463 | 388806 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000057s00009017.1 | PF00191.15 | Annexin | 15 | 79 | 1.30E-20 |
| Glyur000057s00009017.1 | PF00191.15 | Annexin | 89 | 155 | 1.00E-07 |
| Glyur000057s00009017.1 | PF00191.15 | Annexin | 175 | 235 | 1.60E-13 |
| Glyur000057s00009017.1 | PF00191.15 | Annexin | 249 | 313 | 1.20E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.512 |
| SRR1783600 | control | 22.089 |
| SRR1783602 | moderate drought stress | 10.936 |
| SRR1811619 | moderate drought stress | 10.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.481 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.749 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.269 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.156 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.627 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.707 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.125 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.809 |
| SRR2868004 | Drought Stress (root) | 53.361 |
| SRR2967015 | Control (root) | 90.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.004 |
| SRR9715740 | Leaf | 12.697 |
| SRR9715741 | Leaf | 13.173 |
| SRR9715739 | Root | 6.193 |
| SRR9715742 | Root | 17.664 |
| SRR9715743 | Root | 15.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.796 |
| SRR8749028 | MeJA induced 9h | 13.758 |
| SRR8749029 | MeJA induced 9h | 9.738 |
| SRR8749030 | Uninduced | 25.682 |
| SRR8749031 | Uninduced | 18.491 |
| SRR8749032 | Uninduced | 20.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 48.266 |
| SRR8400027 | Control - Root | 26.526 |