Gene detail

Gene detail information of Glyur000057s00009012

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G12380.1	5.00E-97	annexin 8
NR	XP_004142392.1	0	PREDICTED: annexin A6-like [Cucumis sativus]
Swissprot	tr\|P51074\|ANX4_FRAAN	2.00E-142	Annexin-like protein RJ4
trEMBL	tr\|E5GCK3\|E5GCK3_CUCME	0	Annexin {ECO:0000313\|EMBL:ADN34200.1}

Sequence

Transcript Sequence

>Glyur000057s00009012.1
CACACATATTCTTCTGCTGAAAGAGAAAGGAAAAGCTTGATTAATAGTGCTTCTATGGCTACCATTGTTACAAAGCAATCATCTCCCATTGAAGACTCTGAGGCTCTCCAAAAGGCTTTTAAAGGATGGGGAACTGATGAGAAGACAGTTATNACAATATTGGGTCATAGAAATGTTTATCAGAGGCAACAAATCAGAAAGGCTTATGAGGAACTATACCAAGAGGATCTCATCAAGCGCCTTGAGTCTGAGCTCTCTGGTGACTTTGAGAGAGCTGTGTACCGTTGGATGCTGGAGCCTGCAGATCGTGATGCTGTTATGGCCAATGTAGCCATCAGAGATGGTAGCAAAGGTTATCATGTGATTGTGGAAATTGCTTGTGTCCTTTCACCTCAAGAGGTCTTGGCTATGAGAAGTGCCTATCACAAACGTTACAAGCGTTCCTTAGAAGAAGATTTGTTGGTTGGGTTGGTGAGCTCATATAGGTATGGTGGGGATGAAATCAATGCCAAATTGGCAAAAACTGAGGCTGATATTCTTCATGAATCTATCAAGGAAAAGAAAGGCAACCATGAAGAGGCTATCAGAATCCTTACCACAAGGAGCAAGACTCAACTTCTGGCAACTTTCAACCGTTACAGAGATGACCATGGCACTTCCATAACTAAGGTTCTGCGCAATGTGCTGAAAAGGATTGGAACTGATGAGGATGGACTCNCCCGTGTGGTGGTCACAAGGGCTGAGAAGGATCTGAAGGACATCAAAGAGCTCTATTATAAGAGAAACAGTGTTCACCTTGAGGATGCAGTTGCCAAGGAAATCTCAGGGGACTACAAGAAATTCATCCTCACCTTAGAAATAAACATTCAAACTATGGCTACCCTTATTGCTCCCAGCAACCATTCTCCCCTTGAAGATGCTGAAGCTCTCAGAAAGGCTTTTGAAGGATGGGGGACTGATGAGAACAGTGTGATAGCAATACTGGGTCATAGAAATGTTCATCAGAGACAGCAAATCAGAAAGGCTTATGAGGAACTTTACCAAGAGGATCTTGTGAAACGCTTGGAATCTGAGATCAAAGGAGAATTTGAGAAAGCTGTGTACCGGTGGATGCTGGAACCTGCTGATCGTGATGCTGTTTTGATCAATGTGGTCATCAAGAGTGGGAAAAACTACGATGTCATTGTGGAGATTTCCTCTGTGCTCTCCCCTGAAGAGCTCTTCGCTGTGAGGCGTGCTTACCTCAACCGCTACAAGCGCTCCTTGGAAGAAGATGTGGCTGCTCATACCTCTGGCCATCTCCGCCAGCTTTTAGTGGGGCTAGTGACCTCATTCAGGTATGTTGGTGATGAGATCAATGCAAAATTGGCACAATCTGAAGCTGAAATTCTTCATGAGGCTGTTAAAGAGAAGAAGGGAAGCCATGAAGAAGCCATCAGGATCTTGACCACAAGGAGCAAGATCCAACTCATTGCAACTTTCAACAGATACAGAGAGACTCATGGCACTTCCATCACTAAGAAACTGTTGGATGAAGGATCTGATGAATTTCAGAAGGCATTGTACACTGCCATTCGTTGCTTCAATGACCACATTAAGTACTATGAAAAGGTGGTGCGTAATGCAATCAAGAAGGTTGGAACTGATGAGGATGCACTGACCCGTGTGGTTGTGAGCAGGGCTGAGAAGGACCTAAAGGTCATTTCAGAAGTTTATTACAAGAGAAACAGTGTTCTTCTTGAGCATGCTGTGGCCAAGGAAACCTCAGGGGACTACAAGAATAATCATTCTCCCAAGGAAGATGCAGAAGCTCTCTGGAAAGCTGTCAAAGGATGGGGGAGTGATGAGAAGGCCATCATAGCTATATTGGGTCATAGAAATGCTGCTCAAAGGCAGCAAATAAGACAAGCTTATCAAGACATTTACCAAGAGGATCTCATCAAACGCCTTGAATCTGAGCTCTCTGGTGACTTTGAGAGAGCAATGTACAGGTGGATATTGGAACCTGCAGAGTGTTATGCTGTGTTGGCCAATGTAGCCATCAGGGGTGCTAACAAAGACTACCATGTGATTGTGGAAATTGCATGTGTACTTCAACCTGAAGAGCTTTTGGTTGTGAGGCGTGCCTACCACAACCGCTACAAGCATTCATTGGAAGAAGATCTTTTGGTTGGATTGGTGGGCTCATTTAGATATGGTGGTGATGAGATCAATTTAAGATTGGCAAAATCTGAAGCTGATATTCTCCATGAGGCCATCATTGAGAAGAAAGGTAACCTTGAAGAAGTTATCAGGATCCTTAGTACAAGGAGCAAGACCCAACTTGGGGCAACTTTCAACCGCTACAGAGATGAACATGACATTTCCATCAGCAAGAAACTGTTGGATGAGGCATCTGATGACTTCCATAAGGCTGTGCATGTTGCAATTCGTTGCATTAATGACCACAAGAAGTACTATGAAAAGCTTTTGGTTGGATTGGTGGGCTCATTTAGATATGGTGGTGATGAGATCAATTTAAGATTGGCAAAATTTGAAGCTGATATTCTTCATGAGGCTATCGTTGAGAAGAAAGGTAACCTTGAAGAAGTTATCAGGATCCTTAGTACAAGGAGCAAGACCCAACTTGGGGCAACTTTCAACCGCTACAGAGATGAACATGACATTTCCATCAGCAAGAAACTGTTGGATGAGGCATCTGATGACTTCCATAAGGCTGTGCATGTTGCAATTCGTTGCATTAATGACCACAAGAAGTACTATGAAAAGGTTCTGCGCAATGCTCTCATAAGGGTTGGAACTGATGAGGATGGACTTACTCGAGTGGTGGTCACAAGGGCTGAGAAGGACCTAAAGGNCATCAAAGAGCTCTATTATAAGAGAAACAGTGTTCACCTTGAGGATGCAGTGGCCAAGGAAATCTCAGGAGACTACAAGAAGTTCCTCCTCATTTTATTGGGGAAAGAACACTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00057	347093	369881	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005509 calcium ion binding

GO:0005544 calcium-dependent phospholipid binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000057s00009012.1	PF00191.15	Annexin	14	76	1.20E-21
Glyur000057s00009012.1	PF00191.15	Annexin	86	135	2.30E-05
Glyur000057s00009012.1	PF00191.15	Annexin	158	207	4.00E-11
Glyur000057s00009012.1	PF00191.15	Annexin	206	267	2.20E-15
Glyur000057s00009012.1	PF00191.15	Annexin	287	350	8.80E-21
Glyur000057s00009012.1	PF00191.15	Annexin	360	423	3.20E-12
Glyur000057s00009012.1	PF00191.15	Annexin	442	505	4.00E-15
Glyur000057s00009012.1	PF00191.15	Annexin	518	576	3.70E-15
Glyur000057s00009012.1	PF00191.15	Annexin	582	645	1.00E-23
Glyur000057s00009012.1	PF00191.15	Annexin	656	713	1.00E-07
Glyur000057s00009012.1	PF00191.15	Annexin	727	789	2.50E-11
Glyur000057s00009012.1	PF00191.15	Annexin	828	890	7.20E-12
Glyur000057s00009012.1	PF00191.15	Annexin	903	967	1.20E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	128.911
SRR1783600	control	128.830
SRR1783602	moderate drought stress	52.680
SRR1811619	moderate drought stress	52.610

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	170.510
DRR006520	Root Summer glycyrrhizin high producing strain	168.009
DRR006521	Root Winter glycyrrhizin high producing strain	79.316
DRR006522	Root Winter glycyrrhizin high producing strain	76.990
DRR006523	Root Summer glycyrrhizin low producing strain	73.758
DRR006524	Root Summer glycyrrhizin low producing strain	73.064
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.175
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.133

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	432.207
SRR2868004	Drought Stress (root)	226.107
SRR2967015	Control (root)	236.848

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.138
SRR9715740	Leaf	1.888
SRR9715741	Leaf	1.799
SRR9715739	Root	119.261
SRR9715742	Root	115.850
SRR9715743	Root	118.368

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	275.978
SRR8749028	MeJA induced 9h	447.755
SRR8749029	MeJA induced 9h	262.950
SRR8749030	Uninduced	151.679
SRR8749031	Uninduced	97.634
SRR8749032	Uninduced	201.291

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	362.214
SRR8400027	Control - Root	310.761