Gene detail information of Glyur000057s00009003.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42150.1 | 3.00E-24 | Glutathione S-transferase family protein |
| NR | XP_004500926.1 | 1.70E-38 | PREDICTED: prostaglandin E synthase 2-like [Cicer arietinum] |
| trEMBL | tr|V7AR02|V7AR02_PHAVU | 6.00E-37 | Uncharacterized protein {ECO:0000313|EMBL:ESW07999.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00057 | 279940 | 282283 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K05309 | PTGES2 | EC:5.3.99.3 | Arachidonic acid metabolism | map00590 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.011 |
| SRR1783600 | control | 1.803 |
| SRR1783602 | moderate drought stress | 2.425 |
| SRR1811619 | moderate drought stress | 2.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.886 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.952 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.358 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.917 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.199 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.329 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.745 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.354 |
| SRR2868004 | Drought Stress (root) | 5.010 |
| SRR2967015 | Control (root) | 5.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.708 |
| SRR9715740 | Leaf | 0.989 |
| SRR9715741 | Leaf | 0.474 |
| SRR9715739 | Root | 0.180 |
| SRR9715742 | Root | 0.353 |
| SRR9715743 | Root | 0.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.881 |
| SRR8749028 | MeJA induced 9h | 3.364 |
| SRR8749029 | MeJA induced 9h | 1.889 |
| SRR8749030 | Uninduced | 2.639 |
| SRR8749031 | Uninduced | 2.270 |
| SRR8749032 | Uninduced | 3.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.895 |
| SRR8400027 | Control - Root | 2.825 |