Gene detail information of Glyur000057s00008995.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41310.1 | 6.00E-51 | response regulator 3 |
| NR | XP_004511028.1 | 3.17E-113 | PREDICTED: two-component response regulator ARR9-like [Cicer arietinum] |
| COG | YP_001302680.1 | 2.00E-13 | two-component hybrid sensor kinase/response regulator [Parabacteroides distasonis ATCC 8503] |
| Swissprot | tr|O80366|ARR9_ARATH | 6.00E-72 | Two-component response regulator ARR9 |
| trEMBL | tr|I1MIR9|I1MIR9_SOYBN | 6.00E-111 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G37770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00057 | 241355 | 243005 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000057s00008995.1 | PF00072.19 | Response_reg | 11 | 137 | 1.70E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.236 |
| SRR1783600 | control | 0.248 |
| SRR1783602 | moderate drought stress | 0.663 |
| SRR1811619 | moderate drought stress | 0.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.937 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.607 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.159 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.403 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.804 |
| SRR2868004 | Drought Stress (root) | 2.579 |
| SRR2967015 | Control (root) | 6.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.496 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.431 |
| SRR9715742 | Root | 0.216 |
| SRR9715743 | Root | 0.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.608 |
| SRR8749028 | MeJA induced 9h | 9.297 |
| SRR8749029 | MeJA induced 9h | 3.674 |
| SRR8749030 | Uninduced | 5.322 |
| SRR8749031 | Uninduced | 0.608 |
| SRR8749032 | Uninduced | 0.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.212 |
| SRR8400027 | Control - Root | 2.630 |