Gene detail information of Glyur000057s00008974 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07030.1 | 2.00E-107 | Eukaryotic aspartyl protease family protein |
| NR | XP_004511040.1 | 4.19E-176 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Cicer arietinum] |
| Swissprot | tr|Q766C3|NEP1_NEPGR | 6.00E-28 | Aspartic proteinase nepenthesin-1 (Precursor) |
| trEMBL | tr|G7LGR9|G7LGR9_MEDTR | 2.00E-175 | Aspartic proteinase nepenthesin-like protein {ECO:0000313|EMBL:AET02359.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00057 | 75245 | 77999 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000057s00008974.1 | PF14543.1 | TAXi_N | 45 | 170 | 3.60E-20 |
| Glyur000057s00008974.1 | PF14541.1 | TAXi_C | 193 | 309 | 4.40E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 145.234 |
| SRR1783600 | control | 144.444 |
| SRR1783602 | moderate drought stress | 32.176 |
| SRR1811619 | moderate drought stress | 33.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 98.517 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 91.691 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.792 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.791 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.453 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.281 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.792 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 94.832 |
| SRR2868004 | Drought Stress (root) | 27.499 |
| SRR2967015 | Control (root) | 32.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.170 |
| SRR9715740 | Leaf | 0.144 |
| SRR9715741 | Leaf | 0.387 |
| SRR9715739 | Root | 34.306 |
| SRR9715742 | Root | 30.877 |
| SRR9715743 | Root | 29.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.526 |
| SRR8749028 | MeJA induced 9h | 3.852 |
| SRR8749029 | MeJA induced 9h | 3.684 |
| SRR8749030 | Uninduced | 0.092 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 117.216 |
| SRR8400027 | Control - Root | 136.887 |