Gene detail information of Glyur000057s00008963 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05800.2 | 2.00E-07 | |
| NR | XP_004505400.1 | 4.52E-83 | PREDICTED: uncharacterized protein LOC101503423 [Cicer arietinum] |
| trEMBL | tr|G7LHV4|G7LHV4_MEDTR | 3.00E-78 | Myb/SANT-like DNA-binding domain protein {ECO:0000313|EMBL:AET04148.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00057 | 19414 | 20330 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.219 |
| SRR1783600 | control | 8.764 |
| SRR1783602 | moderate drought stress | 6.329 |
| SRR1811619 | moderate drought stress | 6.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.299 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.518 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 43.210 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 42.790 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.108 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.471 |
| SRR2868004 | Drought Stress (root) | 13.449 |
| SRR2967015 | Control (root) | 15.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.268 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.565 |
| SRR8749028 | MeJA induced 9h | 4.716 |
| SRR8749029 | MeJA induced 9h | 2.112 |
| SRR8749030 | Uninduced | 2.524 |
| SRR8749031 | Uninduced | 3.855 |
| SRR8749032 | Uninduced | 2.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.225 |
| SRR8400027 | Control - Root | 0.228 |