Gene detail information of Glyur000056s00004174 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN24762.1 | 3.86E-79 | hypothetical protein glysoja_045881 [Glycine soja] |
| trEMBL | tr|B7FM92|B7FM92_MEDTR | 1.00E-77 | Uncharacterized protein {ECO:0000313|EMBL:AES63873.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00056 | 425220 | 425852 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.584 |
| SRR1783600 | control | 4.346 |
| SRR1783602 | moderate drought stress | 3.489 |
| SRR1811619 | moderate drought stress | 4.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.748 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.491 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.431 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.686 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.324 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.975 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.366 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.252 |
| SRR2868004 | Drought Stress (root) | 3.639 |
| SRR2967015 | Control (root) | 3.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.116 |
| SRR9715740 | Leaf | 0.250 |
| SRR9715741 | Leaf | 0.307 |
| SRR9715739 | Root | 0.452 |
| SRR9715742 | Root | 0.686 |
| SRR9715743 | Root | 0.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.914 |
| SRR8749028 | MeJA induced 9h | 2.881 |
| SRR8749029 | MeJA induced 9h | 2.721 |
| SRR8749030 | Uninduced | 2.762 |
| SRR8749031 | Uninduced | 1.563 |
| SRR8749032 | Uninduced | 2.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.349 |
| SRR8400027 | Control - Root | 2.776 |