Gene detail information of Glyur000056s00004163 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21020.1 | 2.00E-11 | Late embryogenesis abundant protein (LEA) family protein |
| NR | KHN08510.1 | 5.49E-73 | Desiccation-related protein PCC3-06 [Glycine soja] |
| Swissprot | tr|P23283|DRPF_CRAPL | 2.00E-09 | Desiccation-related protein PCC3-06 |
| trEMBL | tr|I1M222|I1M222_SOYBN | 4.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G31120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00056 | 341390 | 349204 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.023 |
| SRR1811619 | moderate drought stress | 0.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.451 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.441 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 107.577 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 104.651 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.131 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.063 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.269 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.337 |
| SRR2868004 | Drought Stress (root) | 0.092 |
| SRR2967015 | Control (root) | 0.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.917 |
| SRR9715740 | Leaf | 1.181 |
| SRR9715741 | Leaf | 2.982 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.087 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.045 |
| SRR8749028 | MeJA induced 9h | 0.095 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.023 |
| SRR8749032 | Uninduced | 0.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.008 |
| SRR8400027 | Control - Root | 0.010 |