Gene detail information of Glyur000056s00004135 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004485773.1 | 7.06E-56 | PREDICTED: uncharacterized protein LOC101492576 [Cicer arietinum] |
| trEMBL | tr|I1MEI0|I1MEI0_SOYBN | 4.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G07960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00056 | 188390 | 188758 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.678 |
| SRR1783600 | control | 2.191 |
| SRR1783602 | moderate drought stress | 2.856 |
| SRR1811619 | moderate drought stress | 3.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.789 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.125 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.381 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.235 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.094 |
| SRR2868004 | Drought Stress (root) | 10.761 |
| SRR2967015 | Control (root) | 10.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.565 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.143 |
| SRR9715739 | Root | 14.640 |
| SRR9715742 | Root | 7.229 |
| SRR9715743 | Root | 6.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.175 |
| SRR8749028 | MeJA induced 9h | 0.182 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.005 |
| SRR8749031 | Uninduced | 0.208 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.786 |
| SRR8400027 | Control - Root | 25.034 |